Exploring miRNAs for developing climate-resilient crops: a perspective review

J Xu, QM Hou, T Khare, SK Verma, V Kumar - Science of the Total …, 2019 - Elsevier
Climate changes and environmental stresses have significant implications on global crop
production and necessitate developing crops that can withstand an array of climate changes …

Bioinformatics for plant and agricultural discoveries in the age of multiomics: A review and case study of maize nodal root growth under water deficit

J Wang, S Sidharth, S Zeng, Y Jiang… - Physiologia …, 2022 - Wiley Online Library
Advances in next‐generation sequencing and other high‐throughput technologies have
facilitated multiomics research, such as genomics, epigenomics, transcriptomics …

Genome-wide identification and evolutionary analysis of TGA transcription factors in soybean

I Ullah, M Magdy, L Wang, M Liu, X Li - Scientific Reports, 2019 - nature.com
The gain of function in genes and gene families is a continuous process and is a key factor
in understanding gene and genome evolution in plants. TGACG-Binding (TGA) transcription …

Natural and artificial selection of multiple alleles revealed through genomic analyses

J Biová, I Kaňovská, YO Chan, MS Immadi… - Frontiers in …, 2024 - frontiersin.org
Genome-to-phenome research in agriculture aims to improve crops through in silico
predictions. Genome-wide association study (GWAS) is potent in identifying genomic loci …

A novel Synthetic phenotype association study approach reveals the landscape of association for genomic variants and phenotypes

M Škrabišová, N Dietz, S Zeng, YO Chan… - Journal of Advanced …, 2022 - Elsevier
Abstract Introduction Genome-Wide Association Studies (GWAS) identify tagging variants in
the genome that are statistically associated with the phenotype because of their linkage …

Recent trends and advances in identification and functional characterization of plant miRNAs

X Zhou, T Khare, V Kumar - Acta physiologiae plantarum, 2020 - Springer
Plant micro-RNAs (miRNAs) are a distinct class of non-coding, small regulatory RNA
molecules emerging as key regulators of growth, development, and stress responses in …

Molecular tools for detecting Pdh1 can improve soybean breeding efficiency by reducing yield losses due to pod shatter

C Miranda, C Culp, M Škrabišová, T Joshi, F Belzile… - Molecular …, 2019 - Springer
Pod shattering is an ancestral trait that promotes seed dispersal; however, shattering can
have substantial yield losses in cultivated soybean. During the improvement process …

Genomic designing for abiotic stress tolerant soybean

MB Ratnaparkhe, GK Satpute, G Kumawat… - Genomic designing for …, 2022 - Springer
Soybean is an agronomically important crop which is rich in seed protein (about 40%) and
oil (about 20%), enriches the soil by fixing nitrogen through symbiosis with bacteria. It is …

SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data

J Wang, MS Hossain, Z Lyu, J Schmutz, G Stacey… - Plant …, 2019 - Wiley Online Library
Abstract The Soybean Gene Atlas project provides a comprehensive map for understanding
gene expression patterns in major soybean tissues from flower, root, leaf, nodule, seed, and …

Elucidating the ecophysiology of soybean pod-sucking stinkbug Riptortus pedestris (Hemiptera: Alydidae) based on de novo genome assembly and transcriptome …

C Li, W Nong, DAT Boncan, WL So, HY Yip, T Swale… - BMC genomics, 2024 - Springer
Food security is important for the ever-growing global population. Soybean, Glycine max (L.)
Merr., is cultivated worldwide providing a key source of food, protein and oil. Hence, it is …