Plasmid transfer by conjugation in Gram-negative bacteria: from the cellular to the community level
Bacterial conjugation, also referred to as bacterial sex, is a major horizontal gene transfer
mechanism through which DNA is transferred from a donor to a recipient bacterium by direct …
mechanism through which DNA is transferred from a donor to a recipient bacterium by direct …
Structural and functional diversity of type IV secretion systems
Considerable progress has been made in recent years in the structural and molecular
biology of type IV secretion systems in Gram-negative bacteria. The latest advances have …
biology of type IV secretion systems in Gram-negative bacteria. The latest advances have …
[HTML][HTML] Z-form extracellular DNA is a structural component of the bacterial biofilm matrix
Biofilms are community architectures adopted by bacteria inclusive of a self-formed
extracellular matrix that protects resident bacteria from diverse environmental stresses and …
extracellular matrix that protects resident bacteria from diverse environmental stresses and …
Genome-wide mapping of mutations at single-nucleotide resolution for protein, metabolic and genome engineering
AD Garst, MC Bassalo, G Pines, SA Lynch… - Nature …, 2017 - nature.com
Improvements in DNA synthesis and sequencing have underpinned comprehensive
assessment of gene function in bacteria and eukaryotes. Genome-wide analyses require …
assessment of gene function in bacteria and eukaryotes. Genome-wide analyses require …
Chromosome organization in bacteria: mechanistic insights into genome structure and function
Bacterial chromosomes are folded to compact DNA and facilitate cellular processes.
Studying model bacteria has revealed aspects of chromosome folding that are applicable to …
Studying model bacteria has revealed aspects of chromosome folding that are applicable to …
Cell biology and molecular basis of denitrification
WG Zumft - Microbiology and molecular biology reviews, 1997 - Am Soc Microbiol
Denitrification is a distinct means of energy conservation, making use of N oxides as
terminal electron acceptors for cellular bioenergetics under anaerobic, microaerophilic, and …
terminal electron acceptors for cellular bioenergetics under anaerobic, microaerophilic, and …
Origins of specificity in protein-DNA recognition
Specific interactions between proteins and DNA are fundamental to many biological
processes. In this review, we provide a revised view of protein-DNA interactions that …
processes. In this review, we provide a revised view of protein-DNA interactions that …
3DNA: a software package for the analysis, rebuilding and visualization of three‐dimensional nucleic acid structures
XJ Lu, WK Olson - Nucleic acids research, 2003 - academic.oup.com
We present a comprehensive software package, 3DNA, for the analysis, reconstruction and
visualization of three‐dimensional nucleic acid structures. Starting from a coordinate file in …
visualization of three‐dimensional nucleic acid structures. Starting from a coordinate file in …
Towards an integrated model of bacterial conjugation
E Cabezón, J Ripoll-Rozada, A Peña… - FEMS microbiology …, 2015 - academic.oup.com
Bacterial conjugation is one of the main mechanisms for horizontal gene transfer. It
constitutes a key element in the dissemination of antibiotic resistance and virulence genes to …
constitutes a key element in the dissemination of antibiotic resistance and virulence genes to …
Diversity, versatility and complexity of bacterial gene regulation mechanisms: opportunities and drawbacks for applications in synthetic biology
I Bervoets, D Charlier - FEMS microbiology reviews, 2019 - academic.oup.com
Gene expression occurs in two essential steps: transcription and translation. In bacteria, the
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …
two processes are tightly coupled in time and space, and highly regulated. Tight regulation …