Benchmarking DNA isolation methods for marine metagenomics

A Demkina, D Slonova, V Mamontov, O Konovalova… - Scientific reports, 2023 - nature.com
Metagenomics is a powerful tool to study marine microbial communities. However, obtaining
high-quality environmental DNA suitable for downstream sequencing applications is a …

The potential of outdoor environments to supply beneficial butyrate-producing bacteria to humans

JE Brame, C Liddicoat, CA Abbott, MF Breed - Science of the total …, 2021 - Elsevier
Butyrate is an important mediator of human health and disease. The mechanisms of action
of butyrate are becoming increasingly well-known. Many commensal bacteria that inhabit …

Fecal Microbiota Transplants for Inflammatory Bowel Disease Treatment: Synthetic‐and Engineered Communities‐Based Microbiota Transplants Are the Future

R Khan, N Roy, H Ali, M Naeem - … Research and Practice, 2022 - Wiley Online Library
The human intestine harbors a huge number of diverse microorganisms where a variety of
complex interactions take place between the microbes as well as the host and gut …

Mechanisms and applications of bacterial sporulation and germination in the intestine

N Koopman, L Remijas, J Seppen, P Setlow… - International journal of …, 2022 - mdpi.com
Recent studies have suggested a major role for endospore forming bacteria within the gut
microbiota, not only as pathogens but also as commensal and beneficial members …

Exploring the role of gut microbiota in advancing personalized medicine

G Huang, R Khan, Y Zheng, PC Lee, Q Li… - Frontiers in …, 2023 - frontiersin.org
Ongoing extensive research in the field of gut microbiota (GM) has highlighted the crucial
role of gut-dwelling microbes in human health. These microbes possess 100 times more …

Multiple sclerosis-associated changes in the composition and immune functions of spore-forming bacteria

E Cekanaviciute, AK Pröbstel, A Thomann, TF Runia… - …, 2018 - Am Soc Microbiol
Multiple sclerosis (MS) is an autoimmune disease of the central nervous system
characterized by adaptive and innate immune system dysregulation. Recent work has …

Ecological adaptations of gut microbiota members and their consequences for use as a new generation of probiotics

T Kubasova, Z Seidlerova, I Rychlik - International journal of molecular …, 2021 - mdpi.com
In this review, we link ecological adaptations of different gut microbiota members with their
potential for use as a new generation of probiotics. Gut microbiota members differ in their …

Culture-dependent screening of endospore-forming clostridia in infant feces

E Ingribelli, N Modrackova, V Tejnecky, J Killer… - BMC microbiology, 2023 - Springer
Background Only a few studies dealt with the occurrence of endospore-forming clostridia in
the microbiota of infants without obvious health complications. Methods A methodology …

Scaling up and down: movement ecology for microorganisms

NI Wisnoski, JT Lennon - Trends in Microbiology, 2023 - cell.com
Movement is critical for the fitness of organisms, both large and small. It dictates how
individuals acquire resources, evade predators, exchange genetic material, and respond to …

Designing specific bacterial 16S primers to sequence and quantitate plant endo-bacteriome

L Chen, M Zhang, D Liu, H Sun, J Wu, Y Huo… - Science China Life …, 2022 - Springer
Plant endophytic bacteria colonize the internal tissues of plants and interact with plants
closely. The past two decades have witnessed the increasing application of next-generation …