Non-B DNA structure-induced genetic instability and evolution
J Zhao, A Bacolla, G Wang, KM Vasquez - Cellular and molecular life …, 2010 - Springer
Repetitive DNA motifs are abundant in the genomes of various species and have the
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
capacity to adopt non-canonical (ie, non-B) DNA structures. Several non-B DNA structures …
Replication fork stalling at natural impediments
Accurate and complete replication of the genome in every cell division is a prerequisite of
genomic stability. Thus, both prokaryotic and eukaryotic replication forks are extremely …
genomic stability. Thus, both prokaryotic and eukaryotic replication forks are extremely …
DNA triple helices: biological consequences and therapeutic potential
A Jain, G Wang, KM Vasquez - Biochimie, 2008 - Elsevier
DNA structure is a critical element in determining its function. The DNA molecule is capable
of adopting a variety of non-canonical structures, including three-stranded (ie triplex) …
of adopting a variety of non-canonical structures, including three-stranded (ie triplex) …
Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins
I Voineagu, V Narayanan… - Proceedings of the …, 2008 - National Acad Sciences
DNA inverted repeats (IRs) are hotspots of genomic instability in both prokaryotes and
eukaryotes. This feature is commonly attributed to their ability to fold into hairpin-or cruciform …
eukaryotes. This feature is commonly attributed to their ability to fold into hairpin-or cruciform …
Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique
Abstract Background The use of RNAseq to resolve the transcriptional organization of an
organism was established in recent years and also showed the complexity and dynamics of …
organism was established in recent years and also showed the complexity and dynamics of …
Potential in vivo roles of nucleic acid triple-helices
The ability of double-stranded DNA to form a triple-helical structure by hydrogen bonding
with a third strand is well established, but the biological functions of these structures remain …
with a third strand is well established, but the biological functions of these structures remain …
Triple helix formation and the antigene strategy for sequence-specific control of gene expression
D Praseuth, AL Guieysse, C Helene - Biochimica et Biophysica Acta (BBA) …, 1999 - Elsevier
Specific gene expression involves the binding of natural ligands to the DNA base pairs.
Among the compounds rationally designed for artificial regulation of gene expression …
Among the compounds rationally designed for artificial regulation of gene expression …
Stability prediction of canonical and non-canonical structures of nucleic acids in various molecular environments and cells
S Takahashi, N Sugimoto - Chemical Society Reviews, 2020 - pubs.rsc.org
Nucleic acids (DNA and RNA) dynamically fold and unfold to exert their functions in cells.
These folding and unfolding behaviours are also the basis for various technical applications …
These folding and unfolding behaviours are also the basis for various technical applications …
DNA interstrand crosslink repair in mammalian cells: step by step
PA Muniandy, J Liu, A Majumdar, S Liu… - Critical reviews in …, 2010 - Taylor & Francis
Interstrand DNA crosslinks (ICLs) are formed by natural products of metabolism and by
chemotherapeutic reagents. Work in E. coli identified a two cycle repair scheme involving …
chemotherapeutic reagents. Work in E. coli identified a two cycle repair scheme involving …
Chemical biology of non-canonical structures of nucleic acids for therapeutic applications
H Tateishi-Karimata, N Sugimoto - Chemical communications, 2020 - pubs.rsc.org
DNA forms not only the canonical duplex structure but also non-canonical structures. Most
potential sequences that induce the formation of non-canonical structures are present in …
potential sequences that induce the formation of non-canonical structures are present in …