Computational reproducibility of Jupyter notebooks from biomedical publications
S Samuel, D Mietchen - GigaScience, 2024 - academic.oup.com
Background Jupyter notebooks facilitate the bundling of executable code with its
documentation and output in one interactive environment, and they represent a popular …
documentation and output in one interactive environment, and they represent a popular …
Enemy release hypothesis.
T Heger, JM Jeschke - Invasion biology: hypotheses and …, 2018 - cabidigitallibrary.org
The enemy release hypothesis is a prominent explanation for invasion success. It is,
however, a complex multi-faceted hypothesis and has multiple sub-hypotheses. Empirical …
however, a complex multi-faceted hypothesis and has multiple sub-hypotheses. Empirical …
[HTML][HTML] Introducing Hypothesis Descriptions
Hypotheses play a central role in the scientific process, yet the way they are introduced often
leaves much room for interpretation, which makes it difficult to use them later on: to study …
leaves much room for interpretation, which makes it difficult to use them later on: to study …
Steps Towards an Infrastructure for Scholarly Synthesis
J Chan, M Akamatsu, D Vargas, L Kawerau… - arXiv preprint arXiv …, 2024 - arxiv.org
Sharing, reusing, and synthesizing knowledge is central to the research process, both
individually, and with others. These core functions are not supported by our formal scholarly …
individually, and with others. These core functions are not supported by our formal scholarly …
FAIR Jupyter: a knowledge graph approach to semantic sharing and granular exploration of a computational notebook reproducibility dataset
S Samuel, D Mietchen - arXiv preprint arXiv:2404.12935, 2024 - arxiv.org
The way in which data are shared can affect their utility and reusability. Here, we
demonstrate how data that we had previously shared in bulk can be mobilized further …
demonstrate how data that we had previously shared in bulk can be mobilized further …
[HTML][HTML] FAIR digital objects for academic publishers
E Schultes - Information Services & Use, 2024 - content.iospress.com
For 200 years, collective scholarly knowledge was advanced by reporting new findings in
the form of narrative text that is rich in logic, pinned to data, hedged with cautious nuance …
the form of narrative text that is rich in logic, pinned to data, hedged with cautious nuance …
Linkflows: Towards Genuine Semantic Publishing in Science
CI Bucur - 2024 - research.vu.nl
Scientific publishing is the main way in which novel research ideas, evidence, data, and
scientific results are communicated, shared and assessed. Currently this process of scientific …
scientific results are communicated, shared and assessed. Currently this process of scientific …
[PDF][PDF] Special Issue on Semantic Publishing with Formalization Papers1.
Considering the abundance of scientific articles that are published every day, keeping up
with the latest research is becoming a significant challenge for researchers in many fields …
with the latest research is becoming a significant challenge for researchers in many fields …
[PDF][PDF] VU Research Portal
CI Bucur - research.vu.nl
Scientific publishing is the main way in which novel research ideas, evidence, data, and
scientific results are communicated, shared and assessed. Currently this process of scientific …
scientific results are communicated, shared and assessed. Currently this process of scientific …