Mycoplasma pneumoniae from the respiratory tract and beyond
KB Waites, L Xiao, Y Liu, MF Balish… - Clinical microbiology …, 2017 - Am Soc Microbiol
Mycoplasma pneumoniae is an important cause of respiratory tract infections in children as
well as adults that can range in severity from mild to life-threatening. Over the past several …
well as adults that can range in severity from mild to life-threatening. Over the past several …
Redefining fundamental concepts of transcription initiation in bacteria
Despite enormous progress in understanding the fundamentals of bacterial gene regulation,
our knowledge remains limited when compared with the number of bacterial genomes and …
our knowledge remains limited when compared with the number of bacterial genomes and …
Comprehensive quantitative modeling of translation efficiency in a genome‐reduced bacterium
Translation efficiency has been mainly studied by ribosome profiling, which only provides an
incomplete picture of translation kinetics. Here, we integrated the absolute quantifications of …
incomplete picture of translation kinetics. Here, we integrated the absolute quantifications of …
Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae
M Trussart, E Yus, S Martinez, D Bau… - Nature …, 2017 - nature.com
DNA-binding proteins are central regulators of chromosome organization; however, in
genome-reduced bacteria their diversity is largely diminished. Whether the chromosomes of …
genome-reduced bacteria their diversity is largely diminished. Whether the chromosomes of …
Bacterial genome architecture shapes global transcriptional regulation by DNA supercoiling
B El Houdaigui, R Forquet, T Hindré… - Nucleic acids …, 2019 - academic.oup.com
DNA supercoiling acts as a global transcriptional regulator in bacteria, that plays an
important role in adapting their expression programme to environmental changes, but for …
important role in adapting their expression programme to environmental changes, but for …
Determination of the gene regulatory network of a genome-reduced bacterium highlights alternative regulation independent of transcription factors
E Yus, V Llorens-Rico, S Martinez, C Gallo, H Eilers… - Cell Systems, 2019 - cell.com
Here, we determined the relative importance of different transcriptional mechanisms in the
genome-reduced bacterium Mycoplasma pneumoniae, by employing an array of …
genome-reduced bacterium Mycoplasma pneumoniae, by employing an array of …
Conserved units of co-expression in bacterial genomes: an evolutionary insight into transcriptional regulation
I Junier, O Rivoire - PloS one, 2016 - journals.plos.org
Genome-wide measurements of transcriptional activity in bacteria indicate that the
transcription of successive genes is strongly correlated beyond the scale of operons. Here …
transcription of successive genes is strongly correlated beyond the scale of operons. Here …
Assessing in vivo the impact of gene context on transcription through DNA supercoiling
I Boulas, L Bruno, S Rimsky, O Espeli… - Nucleic Acids …, 2023 - academic.oup.com
Gene context can have significant impact on gene expression but is currently not integrated
in quantitative models of gene regulation despite known biophysical principles and …
in quantitative models of gene regulation despite known biophysical principles and …
DNA supercoiling: an ancestral regulator of gene expression in pathogenic bacteria?
S Martis, R Forquet, S Reverchon, W Nasser… - Computational and …, 2019 - Elsevier
DNA supercoiling acts as a global and ancestral regulator of bacterial gene expression. In
this review, we advocate that it plays a pivotal role in host-pathogen interactions by …
this review, we advocate that it plays a pivotal role in host-pathogen interactions by …
A genetic toolkit and gene switches to limit Mycoplasma growth for biosafety applications
A Broto, E Gaspari, S Miravet-Verde… - Nature …, 2022 - nature.com
Mycoplasmas have exceptionally streamlined genomes and are strongly adapted to their
many hosts, which provide them with essential nutrients. Owing to their relative genomic …
many hosts, which provide them with essential nutrients. Owing to their relative genomic …