Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data
Liquid chromatography coupled with high-resolution mass spectrometry (LC–HRMS) has
become a workhorse in global metabolomics studies with growing applications across …
become a workhorse in global metabolomics studies with growing applications across …
A guide to machine learning for biologists
The expanding scale and inherent complexity of biological data have encouraged a growing
use of machine learning in biology to build informative and predictive models of the …
use of machine learning in biology to build informative and predictive models of the …
Using machine learning approaches for multi-omics data analysis: A review
With the development of modern high-throughput omic measurement platforms, it has
become essential for biomedical studies to undertake an integrative (combined) approach to …
become essential for biomedical studies to undertake an integrative (combined) approach to …
[HTML][HTML] Integration strategies of multi-omics data for machine learning analysis
Increased availability of high-throughput technologies has generated an ever-growing
number of omics data that seek to portray many different but complementary biological …
number of omics data that seek to portray many different but complementary biological …
Multi-omics data integration, interpretation, and its application
I Subramanian, S Verma, S Kumar… - … and biology insights, 2020 - journals.sagepub.com
To study complex biological processes holistically, it is imperative to take an integrative
approach that combines multi-omics data to highlight the interrelationships of the involved …
approach that combines multi-omics data to highlight the interrelationships of the involved …
Efficient and modular implicit differentiation
Automatic differentiation (autodiff) has revolutionized machine learning. Itallows to express
complex computations by composing elementary ones in creativeways and removes the …
complex computations by composing elementary ones in creativeways and removes the …
A survey on multiview clustering
Clustering is a machine learning paradigm of dividing sample subjects into a number of
groups such that subjects in the same groups are more similar to those in other groups. With …
groups such that subjects in the same groups are more similar to those in other groups. With …
State of the field in multi-omics research: from computational needs to data mining and sharing
Multi-omics, variously called integrated omics, pan-omics, and trans-omics, aims to combine
two or more omics data sets to aid in data analysis, visualization and interpretation to …
two or more omics data sets to aid in data analysis, visualization and interpretation to …
Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materials
Y Zheng, Y Liu, J Yang, L Dong, R Zhang, S Tian… - Nature …, 2023 - nature.com
Abstract Characterization and integration of the genome, epigenome, transcriptome,
proteome and metabolome of different datasets is difficult owing to a lack of ground truth …
proteome and metabolome of different datasets is difficult owing to a lack of ground truth …
Machine learning for multi-omics data integration in cancer
Multi-omics data analysis is an important aspect of cancer molecular biology studies and
has led to ground-breaking discoveries. Many efforts have been made to develop machine …
has led to ground-breaking discoveries. Many efforts have been made to develop machine …