The β-ketoadipate pathway and the biology of self-identity

CS Harwood, RE Parales - Annual review of microbiology, 1996 - annualreviews.org
The β-ketoadipate pathway is a chromosomally encoded convergent pathway for aromatic
compound degradation that is widely distributed in soil bacteria and fungi. One branch …

Molecular biology of the LysR family of transcriptional regulators

MA Schell - Annual review of microbiology, 1993 - annualreviews.org
MOLECULAR BIOLOGY OF THE LysR FAMILY OF TRANSCRIPTIONAL REGULATORS Page 1
Annu. Rev. Microbiol. 1993. 47:597-{J26 Copyright © 1993 by Annual Reviews Inc. All rights …

Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales

D Pérez‐Pantoja, R Donoso, L Agulló… - Environmental …, 2012 - Wiley Online Library
The relevance of the β‐proteobacterial Burkholderiales order in the degradation of a vast
array of aromatic compounds, including several priority pollutants, has been largely …

Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes

T Uchiyama, T Abe, T Ikemura, K Watanabe - Nature biotechnology, 2005 - nature.com
Recent awareness that most microorganisms in the environment are resistant to cultivation
has prompted scientists to directly clone useful genes from environmental metagenomes …

Bacterial transcriptional regulators for degradation pathways of aromatic compounds

D Tropel, JR Van Der Meer - Microbiology and molecular biology …, 2004 - Am Soc Microbiol
Human activities have resulted in the release and introduction into the environment of a
plethora of aromatic chemicals. The interest in discovering how bacteria are dealing with …

Diverse Flavonoids Stimulate NodD1 Binding to nod Gene Promoters in Sinorhizobium meliloti

MC Peck, RF Fisher, SR Long - Journal of bacteriology, 2006 - Am Soc Microbiol
NodD1 is a member of the NodD family of LysR-type transcriptional regulators that mediates
the expression of nodulation (nod) genes in the soil bacterium Sinorhizobium meliloti. Each …

Versatility and complexity: common and uncommon facets of LysR-type transcriptional regulators

AC Baugh, C Momany, EL Neidle - Annual Review of …, 2023 - annualreviews.org
LysR-type transcriptional regulators (LTTRs) form one of the largest families of bacterial
regulators. They are widely distributed and contribute to all aspects of metabolism and …

A comparison between the homocyclic aromatic metabolic pathways from plant-derived compounds by bacteria and fungi

RJM Lubbers, A Dilokpimol, J Visser, MR Mäkelä… - Biotechnology …, 2019 - Elsevier
Aromatic compounds derived from lignin are of great interest for renewable biotechnical
applications. They can serve in many industries eg as biochemical building blocks for …

[HTML][HTML] Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8

Y Shi, L Chai, C Tang, Z Yang, H Zhang, R Chen… - Biotechnology for …, 2013 - Springer
Background Lignin materials are abundant and among the most important potential sources
for biofuel production. Development of an efficient lignin degradation process has …

Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: engineering a mobile aromatic degradative cluster

MA Prieto, E Diaz, JL García - Journal of bacteriology, 1996 - Am Soc Microbiol
We have determined and analyzed the nucleic acid sequence of a 14,855-bp region that
contains the complete gene cluster encoding the 4-hydroxyphenylacetic acid (4-HPA) …