The RNA polymerase II carboxy-terminal domain (CTD) code

D Eick, M Geyer - Chemical reviews, 2013 - ACS Publications
The smallest viable unit of life is the cell. From bacteria to mammals, all cells use the same
nucleic acid-based universal code for the maintenance and inheritance of genetic …

[HTML][HTML] Alternative splicing in plants–coming of age

NH Syed, M Kalyna, Y Marquez, A Barta… - Trends in plant …, 2012 - cell.com
More than 60% of intron-containing genes undergo alternative splicing (AS) in plants. This
number will increase when AS in different tissues, developmental stages, and environmental …

The RNA polymerase II CTD coordinates transcription and RNA processing

JP Hsin, JL Manley - Genes & development, 2012 - genesdev.cshlp.org
The C-terminal domain (CTD) of the RNA polymerase II largest subunit consists of multiple
heptad repeats (consensus Tyr1–Ser2–Pro3–Thr4–Ser5–Pro6–Ser7), varying in number …

Habitat split and the global decline of amphibians

CG Becker, CR Fonseca, CFB Haddad, RF Batista… - Science, 2007 - science.org
The worldwide decline in amphibians has been attributed to several causes, especially
habitat loss and disease. We identified a further factor, namely “habitat split”—defined as …

Rates of in situ transcription and splicing in large human genes

J Singh, RA Padgett - Nature structural & molecular biology, 2009 - nature.com
Transcription and splicing must proceed over genomic distances of hundreds of kilobases in
many human genes. However, the rates and mechanisms of these processes are poorly …

Elongation by RNA polymerase II: the short and long of it

RJ Sims, R Belotserkovskaya… - Genes & …, 2004 - genesdev.cshlp.org
Appreciable advances into the process of transcript elongation by RNA polymerase II (RNAP
II) have identified this stage as a dynamic and highly regulated step of the transcription …

Cracking the RNA polymerase II CTD code

S Egloff, S Murphy - Trends in genetics, 2008 - cell.com
The carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II comprises
multiple tandem conserved heptapeptide repeats, unique to this eukaryotic RNA …

Multiple links between transcription and splicing

AR Kornblihtt, M De La Mata, JP Fededa, MJ Munoz… - Rna, 2004 - rnajournal.cshlp.org
Transcription and pre-mRNA splicing are extremely complex multimolecular processes that
involve protein–DNA, protein–RNA, and protein–protein interactions. Splicing occurs in the …

The splicing factor SC35 has an active role in transcriptional elongation

S Lin, G Coutinho-Mansfield, D Wang… - Nature structural & …, 2008 - nature.com
Mounting evidence suggests that transcription and RNA processing are intimately coupled
in vivo, although each process can occur independently in vitro. It is generally thought that …

A structural perspective of CTD function

A Meinhart, T Kamenski, S Hoeppner… - Genes & …, 2005 - genesdev.cshlp.org
The C-terminal domain (CTD) of RNA polymerase II (Pol II) integrates nuclear events by
binding proteins involved in mRNA biogenesis. CTD-binding proteins recognize a specific …