Uncovering ecological state dynamics with hidden Markov models

BT McClintock, R Langrock, O Gimenez, E Cam… - Ecology …, 2020 - Wiley Online Library
Ecological systems can often be characterised by changes among a finite set of underlying
states pertaining to individuals, populations, communities or entire ecosystems through time …

Mixed hidden markov models for longitudinal data: An overview

A Maruotti - International Statistical Review, 2011 - Wiley Online Library
In this paper we review statistical methods which combine hidden Markov models (HMMs)
and random effects models in a longitudinal setting, leading to the class of so‐called mixed …

[HTML][HTML] PReMiuM: An R package for profile regression mixture models using Dirichlet processes

S Liverani, DI Hastie, L Azizi… - Journal of statistical …, 2015 - ncbi.nlm.nih.gov
PReMiuM is a recently developed R package for Bayesian clustering using a Dirichlet
process mixture model. This model is an alternative to regression models, non …

[图书][B] Nonparametric inference on manifolds: with applications to shape spaces

A Bhattacharya, R Bhattacharya - 2012 - books.google.com
This book introduces in a systematic manner a general nonparametric theory of statistics on
manifolds, with emphasis on manifolds of shapes. The theory has important and varied …

[HTML][HTML] An introduction to infinite HMMs for single-molecule data analysis

I Sgouralis, S Pressé - Biophysical journal, 2017 - cell.com
The hidden Markov model (HMM) has been a workhorse of single-molecule data analysis
and is now commonly used as a stand-alone tool in time series analysis or in conjunction …

Latent Markov models: a review of a general framework for the analysis of longitudinal data with covariates

F Bartolucci, A Farcomeni, F Pennoni - Test, 2014 - Springer
We provide a comprehensive overview of latent Markov (LM) models for the analysis of
longitudinal categorical data. We illustrate the general version of the LM model which …

Bayesian kernel mixtures for counts

A Canale, DB Dunson - Journal of the American Statistical …, 2011 - Taylor & Francis
Although Bayesian nonparametric mixture models for continuous data are well developed,
the literature on related approaches for count data is limited. A common strategy is to use a …

[HTML][HTML] Sampling from Dirichlet process mixture models with unknown concentration parameter: mixing issues in large data implementations

DI Hastie, S Liverani, S Richardson - Statistics and computing, 2015 - Springer
We consider the question of Markov chain Monte Carlo sampling from a general stick-
breaking Dirichlet process mixture model, with concentration parameter α α. This paper …

Time series forecasting for healthcare diagnosis and prognostics with the focus on cardiovascular diseases

C Bui, N Pham, A Vo, A Tran, A Nguyen… - … Conference on the …, 2018 - Springer
Time series forecasting has been a prosperous filed of science due to its popularity in real-
world applications, yet being challenge in method developments. In medical applications …

On the frequentist properties of Bayesian nonparametric methods

J Rousseau - Annual Review of Statistics and Its Application, 2016 - annualreviews.org
In this paper, I review the main results on the asymptotic properties of the posterior
distribution in nonparametric or high-dimensional models. In particular, I explain how …