The analysis of eight transcriptomes from all poriferan classes reveals surprising genetic complexity in sponges

A Riesgo, N Farrar, PJ Windsor… - … biology and evolution, 2014 - academic.oup.com
Sponges (Porifera) are among the earliest evolving metazoans. Their filter-feeding body
plan based on choanocyte chambers organized into a complex aquiferous system is so …

Articulating “archiannelids”: Phylogenomics and annelid relationships, with emphasis on meiofaunal taxa

SCS Andrade, M Novo, GY Kawauchi… - Molecular Biology …, 2015 - academic.oup.com
Annelid disparity has resulted in morphological-based classifications that disagree with
phylogenies based on Sanger sequencing and phylogenomic analyses. However, the data …

[HTML][HTML] A genome sequence for Biomphalaria pfeifferi, the major vector snail for the human-infecting parasite Schistosoma mansoni

L Bu, L Lu, MR Laidemitt, SM Zhang… - PLoS neglected …, 2023 - journals.plos.org
Background Biomphalaria pfeifferi is the world's most widely distributed and commonly
implicated vector snail species for the causative agent of human intestinal schistosomiasis …

[HTML][HTML] Earthworm toxicogenomics: a renewed genome-wide quest for novel biomarkers and mechanistic insights

P Gong, EJ Perkins - Applied Soil Ecology, 2016 - Elsevier
As sentinel species, earthworms such as Eisenia spp. and Lumbricus spp. have been
considered among the best bioindicators or biomonitors for soil ecosystems owing to their …

A new orthology assessment method for phylogenomic data: unrooted phylogenetic orthology

JA Ballesteros, G Hormiga - Molecular Biology and Evolution, 2016 - academic.oup.com
Current sequencing technologies are making available unprecedented amounts of genetic
data for a large variety of species including nonmodel organisms. Although many …

Bioinformatic prediction of Trichoplax adhaerens regulatory peptides

M Nikitin - General and comparative endocrinology, 2015 - Elsevier
Trichoplax adhaerens (phylum Placozoa) is a very simple organism that lacks a nervous
system. However, its genome contains many genes essential for neuronal function and …

[HTML][HTML] Phylogenomic analyses of Crassiclitellata support major Northern and Southern Hemisphere clades and a Pangaean origin for earthworms

FE Anderson, BW Williams, KM Horn, C Erséus… - BMC Evolutionary …, 2017 - Springer
Abstract Background Earthworms (Crassiclitellata) are a diverse group of annelids of
substantial ecological and economic importance. Earthworms are primarily terrestrial …

Complex taxonomy of the 'brush tail'peregrine earthworm Pontoscolex corethrurus

S Taheri, S James, V Roy, T Decaëns… - Molecular Phylogenetics …, 2018 - Elsevier
Pontoscolex corethrurus is the most widespread earthworm species in tropical and sub-
tropical zones and one of the most studied in soil science. Although, ecological interactions …

[HTML][HTML] Transcriptomic analysis of differential host gene expression upon uptake of symbionts: a case study with Symbiodinium and the major bioeroding sponge …

A Riesgo, K Peterson, C Richardson, T Heist… - BMC genomics, 2014 - Springer
Background We have a limited understanding of genomic interactions that occur among
partners for many symbioses. One of the most important symbioses in tropical reef habitats …

[HTML][HTML] Genetic variation in populations of the earthworm, Lumbricus rubellus, across contaminated mine sites

C Anderson, L Cunha, P Sechi, P Kille, D Spurgeon - BMC genetics, 2017 - Springer
Background Populations of the earthworm, Lumbricus rubellus, are commonly found across
highly contaminated former mine sites and are considered to have under-gone selection for …