Synthetic lethality and cancer
A synthetic lethal interaction occurs between two genes when the perturbation of either gene
alone is viable but the perturbation of both genes simultaneously results in the loss of …
alone is viable but the perturbation of both genes simultaneously results in the loss of …
Global genetic networks and the genotype-to-phenotype relationship
Genetic interactions identify combinations of genetic variants that impinge on phenotype.
With whole-genome sequence information available for thousands of individuals within a …
With whole-genome sequence information available for thousands of individuals within a …
Integrative approaches for finding modular structure in biological networks
A central goal of systems biology is to elucidate the structural and functional architecture of
the cell. To this end, large and complex networks of molecular interactions are being rapidly …
the cell. To this end, large and complex networks of molecular interactions are being rapidly …
Complex synthetic lethality in cancer
The concept of synthetic lethality has been widely applied to identify therapeutic targets in
cancer, with varying degrees of success. The standard approach normally involves …
cancer, with varying degrees of success. The standard approach normally involves …
Mitochondria, energetics, epigenetics, and cellular responses to stress
DT Shaughnessy, K McAllister, L Worth… - Environmental …, 2014 - ehp.niehs.nih.gov
Background: Cells respond to environmental stressors through several key pathways,
including response to reactive oxygen species (ROS), nutrient and ATP sensing, DNA …
including response to reactive oxygen species (ROS), nutrient and ATP sensing, DNA …
Environmental robustness of the global yeast genetic interaction network
INTRODUCTION Genetic interactions are identified when variants in different genes
combine to generate an unusual phenotype compared with the expected combined effect of …
combine to generate an unusual phenotype compared with the expected combined effect of …
[HTML][HTML] A network of conserved synthetic lethal interactions for exploration of precision cancer therapy
An emerging therapeutic strategy for cancer is to induce selective lethality in a tumor by
exploiting interactions between its driving mutations and specific drug targets. Here we use …
exploiting interactions between its driving mutations and specific drug targets. Here we use …
Mec1, INO80, and the PAF1 complex cooperate to limit transcription replication conflicts through RNAPII removal during replication stress
J Poli, CB Gerhold, A Tosi, N Hustedt… - Genes & …, 2016 - genesdev.cshlp.org
Little is known about how cells ensure DNA replication in the face of RNA polymerase II
(RNAPII)-mediated transcription, especially under conditions of replicative stress. Here we …
(RNAPII)-mediated transcription, especially under conditions of replicative stress. Here we …
An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair
Histone modifications are major determinants of DNA double-strand break (DSB) response
and repair. Here we elucidate a DSB repair function for transcription-coupled Set2 …
and repair. Here we elucidate a DSB repair function for transcription-coupled Set2 …
Single-cell and multivariate approaches in genetic perturbation screens
Large-scale genetic perturbation screens are a classical approach in biology and have been
crucial for many discoveries. New technologies can now provide unbiased quantification of …
crucial for many discoveries. New technologies can now provide unbiased quantification of …