Crop breeding chips and genotyping platforms: progress, challenges, and perspectives

A Rasheed, Y Hao, X Xia, A Khan, Y Xu, RK Varshney… - Molecular plant, 2017 - cell.com
There is a rapidly rising trend in the development and application of molecular marker
assays for gene mapping and discovery in field crops and trees. Thus far, more than 50 SNP …

[PDF][PDF] High-throughput SNP genotyping to accelerate crop improvement.

MJ Thomson - 2014 - Citeseer
Recent advances in next-generation sequencing (NGS) and single nucleotide
polymorphism (SNP) genotyping promise to greatly accelerate crop improvement if properly …

Development and validation of KASP assays for genes underpinning key economic traits in bread wheat

A Rasheed, W Wen, F Gao, S Zhai, H Jin, J Liu… - Theoretical and Applied …, 2016 - Springer
Key message We developed and validated a robust marker toolkit for high-throughput and
cost-effective screening of a large number of functional genes in wheat. Abstract Functional …

A reference genome for Nicotiana tabacum enables map-based cloning of homeologous loci implicated in nitrogen utilization efficiency

KD Edwards, N Fernandez-Pozo, K Drake-Stowe… - BMC genomics, 2017 - Springer
Abstract Background Tobacco (Nicotiana tabacum) is an important plant model system that
has played a key role in the early development of molecular plant biology. The tobacco …

Allelic Variation of MYB10 Is the Major Force Controlling Natural Variation in Skin and Flesh Color in Strawberry (Fragaria spp.) Fruit

C Castillejo, V Waurich, H Wagner, R Ramos… - The Plant …, 2020 - academic.oup.com
The fruits of diploid and octoploid strawberry (Fragaria spp) show substantial natural
variation in color due to distinct anthocyanin accumulation and distribution patterns …

Maize lethal necrosis (MLN), an emerging threat to maize-based food security in sub-Saharan Africa

G Mahuku, BE Lockhart, B Wanjala… - …, 2015 - Am Phytopath Society
In sub-Saharan Africa, maize is a staple food and key determinant of food security for
smallholder farming communities. Pest and disease outbreaks are key constraints to maize …

Integrated genomic selection for accelerating breeding programs of climate-smart cereals

D Sinha, AK Maurya, G Abdi, M Majeed, R Agarwal… - Genes, 2023 - mdpi.com
Rapidly rising population and climate changes are two critical issues that require immediate
action to achieve sustainable development goals. The rising population is posing increased …

Towards a whole‐genome sequence for rye (Secale cereale L.)

E Bauer, T Schmutzer, I Barilar, M Mascher… - The Plant …, 2017 - Wiley Online Library
We report on a whole‐genome draft sequence of rye (Secale cereale L.). Rye is a diploid
Triticeae species closely related to wheat and barley, and an important crop for food and …

Genetic gains in grain yield through genomic selection in eight bi‐parental maize populations under drought stress

Y Beyene, K Semagn, S Mugo, A Tarekegne… - Crop …, 2015 - Wiley Online Library
Genomic selection incorporates all the available marker information into a model to predict
genetic values of breeding progenies for selection. The objective of this study was to …

Meloidogyne enterolobii, a Major Threat to Tomato Production: Current Status and Future Prospects for Its Management

AN Philbrick, TB Adhikari, FJ Louws… - Frontiers in plant …, 2020 - frontiersin.org
The guava root-knot nematode, Meloidogyne enterolobii (Syn. M. mayaguensis), is an
emerging pathogen to many crops in the world. This nematode can cause chlorosis …