XRN 5′→ 3′ exoribonucleases: structure, mechanisms and functions

VK Nagarajan, CI Jones, SF Newbury… - Biochimica et Biophysica …, 2013 - Elsevier
The XRN family of 5′→ 3′ exoribonucleases is critical for ensuring the fidelity of cellular
RNA turnover in eukaryotes. Highly conserved across species, the family is typically …

Everything You Ever Wanted to Know About Saccharomyces cerevisiae Telomeres: Beginning to End

RJ Wellinger, VA Zakian - Genetics, 2012 - academic.oup.com
The mechanisms that maintain the stability of chromosome ends have broad impact on
genome integrity in all eukaryotes. Budding yeast is a premier organism for telomere …

[HTML][HTML] Transcriptional read-through of the long non-coding RNA SVALKA governs plant cold acclimation

P Kindgren, R Ard, M Ivanov, S Marquardt - Nature communications, 2018 - nature.com
Most DNA in the genomes of higher organisms does not encode proteins, yet much is
transcribed by RNA polymerase II (RNAPII) into long non-coding RNAs (lncRNAs). The …

[PDF][PDF] Integrator is a genome-wide attenuator of non-productive transcription

S Lykke-Andersen, K Žumer, EŠ Molska, JO Rouvière… - Molecular cell, 2021 - cell.com
Termination of RNA polymerase II (RNAPII) transcription in metazoans relies largely on the
cleavage and polyadenylation (CPA) and integrator (INT) complexes originally found to act …

[PDF][PDF] Antisense-mediated transcript knockdown triggers premature transcription termination

JS Lee, JT Mendell - Molecular cell, 2020 - cell.com
Antisense oligonucleotides (ASOs) that trigger RNase-H-mediated cleavage are commonly
used to knock down transcripts for experimental or therapeutic purposes. In particular, ASOs …

Unravelling the means to an end: RNA polymerase II transcription termination

JN Kuehner, EL Pearson, C Moore - Nature reviews Molecular cell …, 2011 - nature.com
The pervasiveness of RNA synthesis in eukaryotes is largely the result of RNA polymerase II
(Pol II)-mediated transcription, and termination of its activity is necessary to partition the …

[PDF][PDF] Transcription dynamics

GL Hager, JG McNally, T Misteli - Molecular cell, 2009 - cell.com
All aspects of transcription and its regulation involve dynamic events. The basal transcription
machinery and regulatory components are dynamically recruited to their target genes, and …

Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation

S Millevoi, S Vagner - Nucleic acids research, 2010 - academic.oup.com
ABSTRACT Messenger RNA (mRNA) 3′ end formation is a nuclear process through which
all eukaryotic primary transcripts are endonucleolytically cleaved and most of them acquire a …

Transcription termination by nuclear RNA polymerases

P Richard, JL Manley - Genes & development, 2009 - genesdev.cshlp.org
Gene transcription in the cell nucleus is a complex and highly regulated process.
Transcription in eukaryotes requires three distinct RNA polymerases, each of which employs …

Cracking the RNA polymerase II CTD code

S Egloff, S Murphy - Trends in genetics, 2008 - cell.com
The carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II comprises
multiple tandem conserved heptapeptide repeats, unique to this eukaryotic RNA …