Ecological modelling approaches for predicting emergent properties in microbial communities
NI van den Berg, D Machado, S Santos… - Nature ecology & …, 2022 - nature.com
Recent studies have brought forward the critical role of emergent properties in shaping
microbial communities and the ecosystems of which they are a part. Emergent properties …
microbial communities and the ecosystems of which they are a part. Emergent properties …
Trophic interactions and the drivers of microbial community assembly
Despite numerous surveys of gene and species content in heterotrophic microbial
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
Plant response to drought stress involves fungi and bacteria that live on and in plants and in
the rhizosphere, yet the stability of these myco-and micro-biomes remains poorly …
the rhizosphere, yet the stability of these myco-and micro-biomes remains poorly …
Phylotype diversity within soil fungal functional groups drives ecosystem stability
Soil fungi are fundamental to plant productivity, yet their influence on the temporal stability of
global terrestrial ecosystems, and their capacity to buffer plant productivity against extreme …
global terrestrial ecosystems, and their capacity to buffer plant productivity against extreme …
Nutrient supply controls the linkage between species abundance and ecological interactions in marine bacterial communities
Nutrient scarcity is pervasive for natural microbial communities, affecting species
reproduction and co-existence. However, it remains unclear whether there are general rules …
reproduction and co-existence. However, it remains unclear whether there are general rules …
Emergent phases of ecological diversity and dynamics mapped in microcosms
From tropical forests to gut microbiomes, ecological communities host notably high numbers
of coexisting species. Beyond high biodiversity, communities exhibit a range of complex …
of coexisting species. Beyond high biodiversity, communities exhibit a range of complex …
Long-term organic fertilizer substitution increases rice yield by improving soil properties and regulating soil bacteria
J Liu, A Shu, W Song, W Shi, M Li, W Zhang, Z Li, G Liu… - Geoderma, 2021 - Elsevier
Applying organic and inorganic fertilizers together could sustainably increase crop yields.
The effects of long-term organic fertilizer substitution on soil microbial community structure …
The effects of long-term organic fertilizer substitution on soil microbial community structure …
In vitro interaction network of a synthetic gut bacterial community
AS Weiss, AG Burrichter, AC Durai Raj… - The ISME …, 2022 - academic.oup.com
A key challenge in microbiome research is to predict the functionality of microbial
communities based on community membership and (meta)-genomic data. As central …
communities based on community membership and (meta)-genomic data. As central …
Spatiotemporal dynamics of root exudates drive microbial adaptation mechanisms under day-night alterations in constructed wetlands
X Zhao, M Guo, T Zhang, S Bai, Y Meng, Y Tian… - Chemical Engineering …, 2023 - Elsevier
Root exudates, as plant-derived metabolites, play a pivotal role in shaping the assembly of
rhizosphere microorganisms by acting as nutrients and signals. However, the spatial …
rhizosphere microorganisms by acting as nutrients and signals. However, the spatial …
[HTML][HTML] Bacteria-driven phthalic acid ester biodegradation: current status and emerging opportunities
The extensive use of phthalic acid esters (PAEs) has led to their widespread distribution
across various environments. As PAEs pose significant threats to human health, it is urgent …
across various environments. As PAEs pose significant threats to human health, it is urgent …