Accelerating climate resilient plant breeding by applying next-generation artificial intelligence

AL Harfouche, DA Jacobson, D Kainer, JC Romero… - Trends in …, 2019 - cell.com
Breeding crops for high yield and superior adaptability to new and variable climates is
imperative to ensure continued food security, biomass production, and ecosystem services …

Quantitative epigenetics and evolution

JA Banta, CL Richards - Heredity, 2018 - nature.com
Epigenetics refers to chemical modifications of chromatin or transcribed DNA that can
influence gene activity and expression without changes in DNA sequence. The last 20 years …

A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms

H Tsugawa, R Nakabayashi, T Mori, Y Yamada… - Nature …, 2019 - nature.com
We report a computational approach (implemented in MS-DIAL 3.0; http://prime. psc. riken.
jp/) for metabolite structure characterization using fully 13C-labeled and non-labeled plants …

[HTML][HTML] High-throughput phenotyping enabled genetic dissection of crop lodging in wheat

D Singh, X Wang, U Kumar, L Gao, M Noor… - Frontiers in plant …, 2019 - frontiersin.org
Novel high-throughput phenotyping (HTP) approaches are needed to advance the
understanding of genotype-to-phenotype and accelerate plant breeding. The first generation …

[HTML][HTML] Investigating drought tolerance in chickpea using genome-wide association mapping and genomic selection based on whole-genome resequencing data

Y Li, P Ruperao, J Batley, D Edwards, T Khan… - Frontiers in Plant …, 2018 - frontiersin.org
Drought tolerance is a complex trait that involves numerous genes. Identifying key causal
genes or linked molecular markers can facilitate the fast development of drought tolerant …

Genetic architecture of plant stress resistance: multi‐trait genome‐wide association mapping

MPM Thoen, NH Davila Olivas, KJ Kloth… - New …, 2017 - Wiley Online Library
Plants are exposed to combinations of various biotic and abiotic stresses, but stress
responses are usually investigated for single stresses only. Here, we investigated the …

Complex evolution of novel red floral color in Petunia

AE Berardi, K Esfeld, L Jäggi, T Mandel… - The plant …, 2021 - academic.oup.com
Red flower color has arisen multiple times and is generally associated with hummingbird
pollination. The majority of evolutionary transitions to red color proceeded from purple …

Genome‐wide association mapping and comparative genomics identifies genomic regions governing grain nutritional traits in finger millet (Eleusine coracana L …

S Puranik, PP Sahu, S Beynon… - Plants, People …, 2020 - Wiley Online Library
Societal Impact Statement Micronutrient deficiency is a serious and underestimated global
health concern. Identifying existing micronutritional richness in traditional crops, and …

Genome-wide association of the metabolic shifts underpinning dark-induced senescence in Arabidopsis

F Zhu, S Alseekh, K Koper, H Tong, Z Nikoloski… - The Plant …, 2022 - academic.oup.com
Dark-induced senescence provokes profound metabolic shifts to recycle nutrients and to
guarantee plant survival. To date, research on these processes has largely focused on …

Parental DNA methylation states are associated with heterosis in epigenetic hybrids

K Lauss, R Wardenaar, R Oka, MHA van Hulten… - Plant …, 2018 - academic.oup.com
Despite the importance and wide exploitation of heterosis in commercial crop breeding, the
molecular mechanisms behind this phenomenon are not completely understood. Recent …