The many roles of BAF (mSWI/SNF) and PBAF complexes in cancer

C Hodges, JG Kirkland… - Cold Spring …, 2016 - perspectivesinmedicine.cshlp.org
During the last decade, a host of epigenetic mechanisms were found to contribute to cancer
and other human diseases. Several genomic studies have revealed that∼ 20% of …

Regulation of alternative splicing through coupling with transcription and chromatin structure

S Naftelberg, IE Schor, G Ast… - Annual review of …, 2015 - annualreviews.org
Alternative precursor messenger RNA (pre-mRNA) splicing plays a pivotal role in the flow of
genetic information from DNA to proteins by expanding the coding capacity of genomes …

Coupling of RNA polymerase II transcription elongation with pre-mRNA splicing

T Saldi, MA Cortazar, RM Sheridan… - Journal of molecular …, 2016 - Elsevier
Pre-mRNA maturation frequently occurs at the same time and place as transcription by RNA
polymerase II. The co-transcriptionality of mRNA processing has permitted the evolution of …

[HTML][HTML] Epigenetics in alternative pre-mRNA splicing

RF Luco, M Allo, IE Schor, AR Kornblihtt, T Misteli - Cell, 2011 - cell.com
Alternative splicing plays critical roles in differentiation, development, and disease and is a
major source for protein diversity in higher eukaryotes. Analysis of alternative splicing …

Transcription factor Foxp3 and its protein partners form a complex regulatory network

D Rudra, P Deroos, A Chaudhry, RE Niec, A Arvey… - Nature …, 2012 - nature.com
The transcription factor Foxp3 is indispensible for the differentiation and function of
regulatory T cells (Treg cells). To gain insights into the molecular mechanisms of Foxp3 …

Biased chromatin signatures around polyadenylation sites and exons

N Spies, CB Nielsen, RA Padgett, CB Burge - Molecular cell, 2009 - cell.com
Core RNA-processing reactions in eukaryotic cells occur cotranscriptionally in a chromatin
context, but the relationship between chromatin structure and pre-mRNA processing is …

Histone H3 lysine 9 trimethylation and HP1γ favor inclusion of alternative exons

V Saint-André, E Batsché, C Rachez… - Nature structural & …, 2011 - nature.com
Pre-messenger RNAs (pre-mRNAs) maturation is initiated cotranscriptionally. It is therefore
conceivable that chromatin-borne information participates in alternative splicing. Here we …

Transcription and splicing: A two‐way street

M Tellier, I Maudlin, S Murphy - Wiley Interdisciplinary Reviews …, 2020 - Wiley Online Library
RNA synthesis by RNA polymerase II and RNA processing are closely coupled during the
transcription cycle of protein‐coding genes. This coupling affords opportunities for quality …

SWI2/SNF2 ATPase CHR2 remodels pri-miRNAs via Serrate to impede miRNA production

Z Wang, Z Ma, C Castillo-González, D Sun, Y Li, B Yu… - Nature, 2018 - nature.com
Chromatin remodelling factors (CHRs) typically function to alter chromatin structure. CHRs
also reside in ribonucleoprotein complexes, but little is known about their RNA-related …

Histone deacetylase activity modulates alternative splicing

J Hnilicová, S Hozeifi, E Dušková, J Icha… - PloS one, 2011 - journals.plos.org
There is increasing evidence to suggest that splicing decisions are largely made when the
nascent RNA is still associated with chromatin. Here we demonstrate that activity of histone …