Determinants of genetic diversity
H Ellegren, N Galtier - Nature Reviews Genetics, 2016 - nature.com
Genetic polymorphism varies among species and within genomes, and has important
implications for the evolution and conservation of species. The determinants of this variation …
implications for the evolution and conservation of species. The determinants of this variation …
Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow
Speciation, the evolution of reproductive isolation among populations, is continuous,
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …
complex, and involves multiple, interacting barriers. Until it is complete, the effects of this …
[HTML][HTML] 1,135 genomes reveal the global pattern of polymorphism in Arabidopsis thaliana
Arabidopsis thaliana serves as a model organism for the study of fundamental physiological,
cellular, and molecular processes. It has also greatly advanced our understanding of …
cellular, and molecular processes. It has also greatly advanced our understanding of …
Visualizing spatial population structure with estimated effective migration surfaces
D Petkova, J Novembre, M Stephens - Nature genetics, 2016 - nature.com
Genetic data often exhibit patterns broadly consistent with'isolation by distance'—a
phenomenon where genetic similarity decays with geographic distance. In a heterogeneous …
phenomenon where genetic similarity decays with geographic distance. In a heterogeneous …
[HTML][HTML] Genome-wide association studies in plant pathosystems: success or failure?
Harnessing natural genetic variation is an established alternative to artificial genetic
variation for investigating the molecular dialog between partners in plant pathosystems …
variation for investigating the molecular dialog between partners in plant pathosystems …
Genome-wide association studies of 14 agronomic traits in rice landraces
X Huang, X Wei, T Sang, Q Zhao, QI Feng, Y Zhao… - Nature …, 2010 - nature.com
Uncovering the genetic basis of agronomic traits in crop landraces that have adapted to
various agro-climatic conditions is important to world food security. Here we have …
various agro-climatic conditions is important to world food security. Here we have …
[HTML][HTML] SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data
Background Phylogenetic trees are widely used for genetic and evolutionary studies in
various organisms. Advanced sequencing technology has dramatically enriched data …
various organisms. Advanced sequencing technology has dramatically enriched data …
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines
S Atwell, YS Huang, BJ Vilhjálmsson, G Willems… - Nature, 2010 - nature.com
Although pioneered by human geneticists as a potential solution to the challenging problem
of finding the genetic basis of common human diseases,, genome-wide association (GWA) …
of finding the genetic basis of common human diseases,, genome-wide association (GWA) …
Whole-genome sequencing of multiple Arabidopsis thaliana populations
The plant Arabidopsis thaliana occurs naturally in many different habitats throughout
Eurasia. As a foundation for identifying genetic variation contributing to adaptation to diverse …
Eurasia. As a foundation for identifying genetic variation contributing to adaptation to diverse …
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
M Jakobsson, NA Rosenberg - Bioinformatics, 2007 - academic.oup.com
Motivation: Clustering of individuals into populations on the basis of multilocus genotypes is
informative in a variety of settings. In population-genetic clustering algorithms, such as …
informative in a variety of settings. In population-genetic clustering algorithms, such as …