The global soil community and its influence on biogeochemistry

TW Crowther, J Van den Hoogen, J Wan, MA Mayes… - Science, 2019 - science.org
BACKGROUND Soil is the largest repository of organic matter on land, storing~ 1500 Gt
carbon, which is at least as much as the vegetation (~ 560 Gt) and atmosphere (~ 750 Gt) …

Dimensions of biodiversity in the Earth mycobiome

KG Peay, PG Kennedy, JM Talbot - Nature Reviews Microbiology, 2016 - nature.com
Fungi represent a large proportion of the genetic diversity on Earth and fungal activity
influences the structure of plant and animal communities, as well as rates of ecosystem …

[HTML][HTML] A few Ascomycota taxa dominate soil fungal communities worldwide

E Egidi, M Delgado-Baquerizo, JM Plett, J Wang… - Nature …, 2019 - nature.com
Despite having key functions in terrestrial ecosystems, information on the dominant soil fungi
and their ecological preferences at the global scale is lacking. To fill this knowledge gap, we …

Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism

J Davison, M Moora, M Öpik, A Adholeya, L Ainsaar… - Science, 2015 - science.org
The global biogeography of microorganisms remains largely unknown, in contrast to the well-
studied diversity patterns of macroorganisms. We used arbuscular mycorrhizal (AM) fungus …

Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species

D Coleman‐Derr, D Desgarennes… - New …, 2016 - Wiley Online Library
Desert plants are hypothesized to survive the environmental stress inherent to these regions
in part thanks to symbioses with microorganisms, and yet these microbial species, the …

Emergence shapes the structure of the seed microbiota

M Barret, M Briand, S Bonneau… - Applied and …, 2015 - Am Soc Microbiol
Seeds carry complex microbial communities, which may exert beneficial or deleterious
effects on plant growth and plant health. To date, the composition of microbial communities …

The diversity and distribution of endophytes across biomes, plant phylogeny and host tissues: how far have we come and where do we go from here?

JG Harrison, EA Griffin - Environmental microbiology, 2020 - Wiley Online Library
The interiors of plants are colonized by diverse microorganisms that are referred to as
endophytes. Endophytes have received much attention over the past few decades, yet many …

Soil carbon content drives the biogeographical distribution of fungal communities in the black soil zone of northeast China

J Liu, Y Sui, Z Yu, Y Shi, H Chu, J Jin, X Liu… - Soil Biology and …, 2015 - Elsevier
Black soils (Mollisols) are one of the most important soil resources for maintaining food
security in China, and they are mainly distributed in northeast China. A previous …

Scraping the bottom of the barrel: are rare high throughput sequences artifacts?

SP Brown, AM Veach, AR Rigdon-Huss, K Grond… - fungal ecology, 2015 - Elsevier
Metabarcoding data generated using next-generation sequencing (NGS) technologies are
overwhelmed with rare taxa and skewed in Operational Taxonomic Unit (OTU) frequencies …

Millions of reads, thousands of taxa: microbial community structure and associations analyzed via marker genes

M Bálint, M Bahram, AM Eren, K Faust… - FEMS microbiology …, 2016 - academic.oup.com
With high-throughput sequencing (HTS), we are able to explore the hidden world of
microscopic organisms to an unpre-cedented level. The fast development of molecular …