Recent advancements in molecular marker-assisted selection and applications in plant breeding programmes

N Hasan, S Choudhary, N Naaz, N Sharma… - Journal of Genetic …, 2021 - Elsevier
Background DNA markers improved the productivity and accuracy of classical plant
breeding by means of marker-assisted selection (MAS). The enormous number of …

Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Antagonistic control of seed dormancy in rice by two bHLH transcription factors

F Xu, J Tang, S Wang, X Cheng, H Wang, S Ou… - Nature …, 2022 - nature.com
Preharvest sprouting (PHS) due to lack of seed dormancy seriously threatens crop
production worldwide. As a complex quantitative trait, breeding of crop cultivars with suitable …

NLRs guard metabolism to coordinate pattern-and effector-triggered immunity

K Zhai, DI Liang, H Li, F Jiao, B Yan, J Liu, Z Lei… - Nature, 2022 - nature.com
Pattern-triggered immunity (PTI) and effector-triggered immunity (ETI) in plants enable them
to respond to pathogens by activating the production of defence metabolites that orchestrate …

[HTML][HTML] Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

Q Zhao, Q Feng, H Lu, Y Li, A Wang, Q Tian, Q Zhan… - Nature …, 2018 - nature.com
The rich genetic diversity in Oryza sativa and Oryza rufipogon serves as the main sources in
rice breeding. Large-scale resequencing has been undertaken to discover allelic variants in …

A quantitative genomics map of rice provides genetic insights and guides breeding

X Wei, J Qiu, K Yong, J Fan, Q Zhang, H Hua, J Liu… - Nature Genetics, 2021 - nature.com
Extensive allelic variation in agronomically important genes serves as the basis of rice
breeding. Here, we present a comprehensive map of rice quantitative trait nucleotides …

Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits

X Du, G Huang, S He, Z Yang, G Sun, X Ma, N Li… - Nature …, 2018 - nature.com
The ancestors of Gossypium arboreum and Gossypium herbaceum provided the A
subgenome for the modern cultivated allotetraploid cotton. Here, we upgraded the G …

OsSPL13 controls grain size in cultivated rice

L Si, J Chen, X Huang, H Gong, J Luo, Q Hou, T Zhou… - Nature …, 2016 - nature.com
Although genetic diversity has a cardinal role in domestication, abundant natural allelic
variations across the rice genome that cause agronomically important differences between …

Aquaporins in plants

C Maurel, Y Boursiac, DT Luu, V Santoni… - Physiological …, 2015 - journals.physiology.org
Aquaporins are membrane channels that facilitate the transport of water and small neutral
molecules across biological membranes of most living organisms. In plants, aquaporins …

Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice

K Yano, E Yamamoto, K Aya, H Takeuchi, P Lo, L Hu… - Nature …, 2016 - nature.com
A genome-wide association study (GWAS) can be a powerful tool for the identification of
genes associated with agronomic traits in crop species, but it is often hindered by population …