Extracellular microbial metabolomics: the state of the art

FR Pinu, SG Villas-Boas - Metabolites, 2017 - mdpi.com
Microorganisms produce and secrete many primary and secondary metabolites to the
surrounding environment during their growth. Therefore, extracellular metabolites provide …

Deciphering hepatocellular carcinoma through metabolomics: from biomarker discovery to therapy evaluation

W Guo, HY Tan, N Wang, X Wang… - Cancer management and …, 2018 - Taylor & Francis
Hepatocellular carcinoma (HCC) is the third most common cause of death from cancer, with
increasing prevalence worldwide. The mortality rate of HCC is similar to its incidence rate …

[PDF][PDF] Breath metabolomics provides an accurate and noninvasive approach for screening cirrhosis, primary, and secondary liver tumors

G Miller‐Atkins, LA Acevedo‐Moreno… - Hepatology …, 2020 - Wiley Online Library
Hepatocellular carcinoma (HCC) and secondary liver tumors, such as colorectal cancer liver
metastases are significant contributors to the overall burden of cancer‐related morality …

Multiomics characterization of fatty acid metabolism for the clinical management of hepatocellular carcinoma

X Huang, B Su, M Li, Y Zhou, X He - Scientific Reports, 2023 - nature.com
Hepatocellular carcinoma (HCC) is a prevalent malignancy and there is a lack of effective
biomarkers for HCC diagnosis. Living organisms are complex, and different omics …

Gut microbiota and holobiont metabolome composition of the medaka fish (Oryzias latipes) are affected by a short exposure to the cyanobacterium Microcystis …

P Foucault, A Gallet, C Duval, B Marie, S Duperron - Aquatic Toxicology, 2022 - Elsevier
Blooms of toxic cyanobacteria are a common stress encountered by aquatic fauna. Evidence
indicates that long-lasting blooms affect fauna-associated microbiota. Because of their …

Data analysis methods for defining biomarkers from omics data

C Li, Z Gao, B Su, G Xu, X Lin - Analytical and Bioanalytical Chemistry, 2022 - Springer
Omics mainly includes genomics, epigenomics, transcriptomics, proteomics and
metabolomics. The rapid development of omics technology has opened up new ways to …

[HTML][HTML] A new feature selection method based on feature distinguishing ability and network influence

Y Qi, B Su, X Lin, H Zhou - Journal of Biomedical Informatics, 2022 - Elsevier
The occurrence and development of diseases are related to the dysfunction of biomolecules
(genes, metabolites, etc.) and the changes of molecule interactions. Identifying the key …

Metabolomic and physiological changes of Chlamydomonas reinhardtii (Chlorophyceae, Chlorophyta) during batch culture development

R Puzanskiy, E Tarakhovskaya, A Shavarda… - Journal of Applied …, 2018 - Springer
During mixotrophic batch culturing, the microalga Chlamydomonas reinhardtii goes through
S-shaped growth kinetics and cells consistently transit from division to death. Photosynthesis …

Lipidome disturbances in preadipocyte differentiation associated with bisphenol A and replacement bisphenol S exposure

J Zeng, J Li, S Liu, Z Yang, Y Zhong, X Chen… - Science of the Total …, 2021 - Elsevier
Bisphenol S (BPS) is the major substitute for the production of bisphenol A (BPA)-free
products and detected in both food and environment. Although the relationship between …

Juice Index: An integrated Sauvignon blanc grape and wine metabolomics database shows mainly seasonal differences

FR Pinu, S Tumanov, C Grose, V Raw, A Albright… - Metabolomics, 2019 - Springer
Abstract Introduction Although Sauvignon Blanc (SB) grapes are cultivated widely
throughout New Zealand, wines from the Marlborough region are most famous for their …