Comprehensive analysis of codon bias in 13 Ganoderma mitochondrial genomes

P Wu, W Xiao, Y Luo, Z Xiong, X Chen, J He… - Frontiers in …, 2023 - frontiersin.org
Introduction Codon usage bias is a prevalent phenomenon observed across various species
and genes. However, the specific attributes of codon usage in the mitochondrial genome of …

The patterns of codon usage between chordates and arthropods are different but co-evolving with mutational biases

I Kotari, C Kosiol, R Borges - Molecular Biology and Evolution, 2024 - academic.oup.com
Different frequencies amongst codons that encode the same amino acid (ie synonymous
codons) have been observed in multiple species. Studies focused on uncovering the forces …

Genomic factors shaping codon usage across the Saccharomycotina subphylum

B Zavala, L Dineen, KJ Fisher, DA Opulente… - bioRxiv, 2024 - biorxiv.org
Codon usage bias, or the unequal use of synonymous codons, is observed across genes,
genomes, and between species. The biased use of synonymous codons has been …

Evolutionary principles underpinning codon usage bias: patterns, functions, and mechanisms

AL Cope, MA Gilchrist, P Shah, E Wallace - 2024 - ecoevorxiv.org
Synonymous codons are used unevenly despite coding for the same amino acid. Recent
work has provided critical insights into the functions, mechanisms, and fitness …