Regulation of gene expression by cis-acting long non-coding RNAs

N Gil, I Ulitsky - Nature Reviews Genetics, 2020 - nature.com
Long non-coding RNAs (lncRNAs) are diverse transcription products emanating from
thousands of loci in mammalian genomes. Cis-acting lncRNAs, which constitute a …

Transcriptional architecture of the mammalian circadian clock

JS Takahashi - Nature Reviews Genetics, 2017 - nature.com
Circadian clocks are endogenous oscillators that control 24-hour physiological and
behavioural processes in organisms. These cell-autonomous clocks are composed of a …

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals

N Koike, SH Yoo, HC Huang, V Kumar, C Lee, TK Kim… - science, 2012 - science.org
The mammalian circadian clock involves a transcriptional feed back loop in which CLOCK
and BMAL1 activate the Period and Cryptochrome genes, which then feedback and repress …

[HTML][HTML] H3K4me3 breadth is linked to cell identity and transcriptional consistency

BA Benayoun, EA Pollina, D Ucar, S Mahmoudi… - Cell, 2014 - cell.com
Trimethylation of histone H3 at lysine 4 (H3K4me3) is a chromatin modification known to
mark the transcription start sites of active genes. Here, we show that H3K4me3 domains that …

Targeting MYC dependence in cancer by inhibiting BET bromodomains

JA Mertz, AR Conery, BM Bryant… - Proceedings of the …, 2011 - National Acad Sciences
The MYC transcription factor is a master regulator of diverse cellular functions and has been
long considered a compelling therapeutic target because of its role in a range of human …

Suppression of inflammation by a synthetic histone mimic

E Nicodeme, KL Jeffrey, U Schaefer, S Beinke… - Nature, 2010 - nature.com
Interaction of pathogens with cells of the immune system results in activation of inflammatory
gene expression. This response, although vital for immune defence, is frequently deleterious …

CDK9: a comprehensive review of its biology, and its role as a potential target for anti-cancer agents

AT Anshabo, R Milne, S Wang, H Albrecht - Frontiers in oncology, 2021 - frontiersin.org
Cyclin-dependent kinases (CDKs) are proteins pivotal to a wide range of cellular functions,
most importantly cell division and transcription, and their dysregulations have been …

AF9 YEATS domain links histone acetylation to DOT1L-mediated H3K79 methylation

Y Li, H Wen, Y Xi, K Tanaka, H Wang, D Peng, Y Ren… - Cell, 2014 - cell.com
The recognition of modified histones by" reader" proteins constitutes a key mechanism
regulating gene expression in the chromatin context. Compared with the great variety of …

The RNA polymerase II carboxy-terminal domain (CTD) code

D Eick, M Geyer - Chemical reviews, 2013 - ACS Publications
The smallest viable unit of life is the cell. From bacteria to mammals, all cells use the same
nucleic acid-based universal code for the maintenance and inheritance of genetic …

ENL links histone acetylation to oncogenic gene expression in acute myeloid leukaemia

L Wan, H Wen, Y Li, J Lyu, Y Xi, T Hoshii, JK Joseph… - Nature, 2017 - nature.com
Cancer cells are characterized by aberrant epigenetic landscapes and often exploit
chromatin machinery to activate oncogenic gene expression programs. Recognition of …