Automatic segmentation of high-throughput RNAi fluorescent cellular images
High-throughput genome-wide RNA interference (RNAi) screening is emerging as an
essential tool to assist biologists in understanding complex cellular processes. The large …
essential tool to assist biologists in understanding complex cellular processes. The large …
Multiple nuclei tracking using integer programming for quantitative cancer cell cycle analysis
Automated cell segmentation and tracking are critical for quantitative analysis of cell cycle
behavior using time-lapse fluorescence microscopy. However, the complex, dynamic cell …
behavior using time-lapse fluorescence microscopy. However, the complex, dynamic cell …
Novel cell segmentation and online SVM for cell cycle phase identification in automated microscopy
Motivation: Automated identification of cell cycle phases captured via fluorescent microscopy
is very important for understanding cell cycle and for drug discovery. In this article, we …
is very important for understanding cell cycle and for drug discovery. In this article, we …
[HTML][HTML] Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images
P Ruusuvuori, T Äijö, S Chowdhury… - BMC …, 2010 - Springer
Background Several algorithms have been proposed for detecting fluorescently labeled
subcellular objects in microscope images. Many of these algorithms have been designed for …
subcellular objects in microscope images. Many of these algorithms have been designed for …
[HTML][HTML] Activation of stress-related signalling pathway in human cells upon SiO2 nanoparticles exposure as an early indicator of cytotoxicity
Abstract Background Nanomaterials such as SiO 2 nanoparticles (SiO 2 NP) are finding
increasing applications in the biomedical and biotechnological fields such as disease …
increasing applications in the biomedical and biotechnological fields such as disease …
Compressive sensing based high-speed time-stretch optical microscopy for two-dimensional image acquisition
In this paper, compressive sensing based high-speed time-stretch optical microscopy for two-
dimensional (2D) image acquisition is proposed and experimentally demonstrated for the …
dimensional (2D) image acquisition is proposed and experimentally demonstrated for the …
[HTML][HTML] Depth-enhanced high-throughput microscopy by compact PSF engineering
N Opatovski, E Nehme, N Zoref, I Barzilai… - Nature …, 2024 - nature.com
High-throughput microscopy is vital for screening applications, where three-dimensional
(3D) cellular models play a key role. However, due to defocus susceptibility, current 3D high …
(3D) cellular models play a key role. However, due to defocus susceptibility, current 3D high …
[HTML][HTML] DICOMization of proprietary files obtained from confocal, whole-slide, and FIB-SEM microscope scanners
The evolution of biomedical imaging technology is allowing the digitization of hundreds of
glass slides at once. There are multiple microscope scanners available in the market …
glass slides at once. There are multiple microscope scanners available in the market …
Prediction by partial approximate matching for lossless image compression
Y Zhang, DA Adjeroh - IEEE transactions on image processing, 2008 - ieeexplore.ieee.org
Context-based modeling is an important step in high-performance lossless data
compression. To effectively define and utilize contexts for natural images is, however, a …
compression. To effectively define and utilize contexts for natural images is, however, a …
Cellular phenotype recognition for high-content RNA interference genome-wide screening
Genome-wide, cell-based screens using high-content screening (HCS) techniques and
automated fluorescence microscopy generate thousands of high-content images that …
automated fluorescence microscopy generate thousands of high-content images that …