[HTML][HTML] Genome-wide CRISPR-dCas9 screens in E. coli identify essential genes and phage host factors

F Rousset, L Cui, E Siouve, C Becavin… - PLoS …, 2018 - journals.plos.org
High-throughput genetic screens are powerful methods to identify genes linked to a given
phenotype. The catalytic null mutant of the Cas9 RNA-guided nuclease (dCas9) can be …

High‐throughput CRISPRi phenotyping identifies new essential genes in Streptococcus pneumoniae

X Liu, C Gallay, M Kjos, A Domenech… - Molecular systems …, 2017 - embopress.org
Genome‐wide screens have discovered a large set of essential genes in the opportunistic
human pathogen Streptococcus pneumoniae. However, the functions of many essential …

The impact of genetic diversity on gene essentiality within the Escherichia coli species

F Rousset, J Cabezas-Caballero, F Piastra-Facon… - Nature …, 2021 - nature.com
Bacteria from the same species can differ widely in their gene content. In Escherichia coli,
the set of genes shared by all strains, known as the core genome, represents about half the …

[HTML][HTML] Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper

V Meyer, MR Andersen, AA Brakhage… - Fungal biology and …, 2016 - Springer
The EUROFUNG network is a virtual centre of multidisciplinary expertise in the field of fungal
biotechnology. The first academic-industry Think Tank was hosted by EUROFUNG to …

Tunable and multifunctional eukaryotic transcription factors based on CRISPR/Cas

F Farzadfard, SD Perli, TK Lu - ACS synthetic biology, 2013 - ACS Publications
Transcriptional regulation is central to the complex behavior of natural biological systems
and synthetic gene circuits. Platforms for the scalable, tunable, and simple modulation of …

Corynebacterium glutamicum Metabolic Engineering with CRISPR Interference (CRISPRi)

S Cleto, JVK Jensen, VF Wendisch, TK Lu - ACS synthetic biology, 2016 - ACS Publications
Corynebacterium glutamicum is an important organism for the industrial production of amino
acids. Metabolic pathways in this organism are usually engineered by conventional methods …

Cas9-mediated targeting of viral RNA in eukaryotic cells

AA Price, TR Sampson, HK Ratner… - Proceedings of the …, 2015 - National Acad Sciences
Clustered, regularly interspaced, short palindromic repeats–CRISPR associated (CRISPR-
Cas) systems are prokaryotic RNA-directed endonuclease machineries that act as an …

[PDF][PDF] Rapid and scalable characterization of CRISPR technologies using an E. coli cell-free transcription-translation system

R Marshall, CS Maxwell, SP Collins, T Jacobsen… - Molecular cell, 2018 - cell.com
CRISPR-Cas systems offer versatile technologies for genome engineering, yet their
implementation has been outpaced by ongoing discoveries of new Cas nucleases and anti …

Knock out of the annexin gene OsAnn3 via CRISPR/Cas9-mediated genome editing decreased cold tolerance in rice

C Shen, Z Que, Y Xia, N Tang, D Li, R He… - Journal of Plant Biology, 2017 - Springer
Plant annexins are Ca 2+-dependent phospholipid-binding proteins and exist as multigene
families in plants. They are implicated in the regulation of plant development as well as …

The new state of the art: Cas9 for gene activation and repression

MF La Russa, LS Qi - Molecular and cellular biology, 2015 - Taylor & Francis
CRISPR-Cas9 technology has rapidly changed the landscape for how biologists and
bioengineers study and manipulate the genome. Derived from the bacterial adaptive …