The ancestral chromatin landscape of land plants

T Hisanaga, S Wu, P Schafran, E Axelsson… - bioRxiv, 2022 - biorxiv.org
In mammals and flowering plants chromatin is modified by DNA methylation (5mC) and
methylation of lysine residues of the N-terminal tail of histone H3 that reflect transcriptional …

The ancestral chromatin landscape of land plants

T Hisanaga, S Wu, P Schafran, E Axelsson… - New …, 2023 - Wiley Online Library
Recent studies have shown that correlations between chromatin modifications and
transcription vary among eukaryotes. This is the case for marked differences between the …

Genome-Wide Identification and Coexpression Network Analysis of DNA Methylation Pathway Genes and Their Differentiated Functions in Ginkgo biloba L.

C Gao, M Deng, X Yang, W Yu, J Cai, Y Shi, Z Zhu… - Forests, 2020 - mdpi.com
DNA methylation plays a vital role in diverse biological processes. DNA methyltransferases
(DNMTs) genes and RNA-directed DNA methylation (RdDM)-related genes are key genes …

Effects of Medium Supplements on Somatic Embryo Maturation and DNA Methylation in Pseudotsuga gaussenii Flous, a Species under Protection

Y Gao, X Chen, Y Cui, H Zhao, R Zhao, C Liu, J Zhao… - Forests, 2022 - mdpi.com
Pseudotsuga gaussenii is a forest species under protection in China. Propagation via
somatic embryogenesis is efficient and needed for recovering this species. In this research …

Decrease in DNA methylation 1 interacts with chromomethylase and like heterochromatin protein 1 in Physcomitrella patens

V Parihar, M Dangwal, D Arya, S Kapoor… - FEBS …, 2019 - Wiley Online Library
The nucleosome remodeling protein decrease in DNA methylation 1 (DDM1)/Lsh maintains
normal levels of DNA methylation. Direct interaction between Lsh and DNA …

Plant Polymerase IV sensitizes chromatin through histone modifications to preclude spread of silencing into protein-coding domains

VH Sundar G, C Swetha, D Basu, K Pachamuthu… - bioRxiv, 2021 - biorxiv.org
Heterochromatin is the predominant architectural feature of genomes that ensures genomic
stability across eukaryotes. It mostly functions in restricting expression of repeats, mobile …

Non-CG methylation is superior to CG methylation in genome regulation

K Domb, A Katz, R Yaari, E Kaisler, VH Nguyen… - bioRxiv, 2020 - biorxiv.org
DNA methylation in plants occurs in CG, CHG, and CHH sites. While depletion of CG
methylation in transposons is associated with ample transcriptional activation, it was mainly …

[PDF][PDF] 2. INTERNATIONAL PARIS CONGRESS ON AGRICULTURE & ANIMAL HUSBANDRY

N TURAN - 2023 - researchgate.net
The genome employs both epigenetic and genetic pathways to generate responses to
various internal and external stimuli. Epigenesis refers to the process by which chemical …

[PDF][PDF] The Renaissance and Enlightenment of Marchantia as a model system

R Jibran - 2022 - scholar.archive.org
The liverwort Marchantia polymorpha has been utilized as a model for biological studies
since the 18th century. In the past few decades there has been a Renaissance in its …

Plant Epigenomics

TK To, JM Kim - Plant Omics: Advances in Big Data Biology, 2022 - cabidigitallibrary.org
Epigenetic regulation is highly conserved in eukaryotes. In general, events mediated by the
genome–such as the regulation of gene activity and establishment and arrangement of …