Genomic selection: genome-wide prediction in plant improvement
Association analysis is used to measure relations between markers and quantitative trait loci
(QTL). Their estimation ignores genes with small effects that trigger underpinning …
(QTL). Their estimation ignores genes with small effects that trigger underpinning …
[HTML][HTML] Breeding schemes for the implementation of genomic selection in wheat (Triticum spp.)
In the last decade the breeding technology referred to as 'genomic selection'(GS) has been
implemented in a variety of species, with particular success in animal breeding. Recent …
implemented in a variety of species, with particular success in animal breeding. Recent …
Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and …
Genomic Selection (GS) is a new breeding method in which genome-wide markers are used
to predict the breeding value of individuals in a breeding population. GS has been shown to …
to predict the breeding value of individuals in a breeding population. GS has been shown to …
Training set optimization under population structure in genomic selection
Key message Population structure must be evaluated before optimization of the training set
population. Maximizing the phenotypic variance captured by the training set is important for …
population. Maximizing the phenotypic variance captured by the training set is important for …
Bandwagons I, too, have known
R Bernardo - Theoretical and applied genetics, 2016 - Springer
Key message Bandwagons come in waves. A plant breeder, just like a surfer, needs to
carefully choose which waves to be on. Abstract A bandwagon is an idea, activity, or cause …
carefully choose which waves to be on. Abstract A bandwagon is an idea, activity, or cause …
Development of a large SNP genotyping array and generation of high-density genetic maps in tomato
SC Sim, G Durstewitz, J Plieske, R Wieseke… - PloS one, 2012 - journals.plos.org
The concurrent development of high-throughput genotyping platforms and next generation
sequencing (NGS) has increased the number and density of genetic markers, the efficiency …
sequencing (NGS) has increased the number and density of genetic markers, the efficiency …
Genome-wide association study, genomic prediction and marker-assisted selection for seed weight in soybean (Glycine max)
Key message Twenty-two loci for soybean SW and candidate genes conditioning seed
development were identified; and prediction accuracies of GS and MAS were estimated …
development were identified; and prediction accuracies of GS and MAS were estimated …
Next generation breeding
D Barabaschi, A Tondelli, F Desiderio, A Volante… - Plant Science, 2016 - Elsevier
The genomic revolution of the past decade has greatly improved our understanding of the
genetic make-up of living organisms. The sequencing of crop genomes has completely …
genetic make-up of living organisms. The sequencing of crop genomes has completely …
Evaluation of genomic prediction methods for Fusarium head blight resistance in wheat
J Rutkoski, J Benson, Y Jia… - The Plant …, 2012 - Wiley Online Library
Fusarium head blight (FHB) resistance is quantitative and difficult to evaluate. Genomic
selection (GS) could accelerate FHB resistance breeding. We used US cooperative FHB …
selection (GS) could accelerate FHB resistance breeding. We used US cooperative FHB …
Genome properties and prospects of genomic prediction of hybrid performance in a breeding program of maize
Maize (Zea mays L.) serves as model plant for heterosis research and is the crop where
hybrid breeding was pioneered. We analyzed genomic and phenotypic data of 1254 hybrids …
hybrid breeding was pioneered. We analyzed genomic and phenotypic data of 1254 hybrids …