[HTML][HTML] Analysis of meristems and plant regeneration at single-cell resolution

RY Liao, JW Wang - Current opinion in plant biology, 2023 - Elsevier
Rapid development of high-throughput single-cell RNA sequencing (scRNA-seq)
technologies offers exciting opportunities to reveal new and rare cell types, previously …

Leveraging Single-Cell Populations to Uncover the Genetic Basis of Complex Traits

MAA Minow, AP Marand… - Annual review of genetics, 2023 - annualreviews.org
The ease and throughput of single-cell genomics have steadily improved, and its current
trajectory suggests that surveying single-cell populations will become routine. We discuss …

[HTML][HTML] Single-cell profiling of Arabidopsis leaves to Pseudomonas syringae infection

J Zhu, S Lolle, A Tang, B Guel, B Kvitko, B Cole… - Cell reports, 2023 - cell.com
Plant response to pathogen infection varies within a leaf, yet this heterogeneity is not well
resolved. We expose Arabidopsis to Pseudomonas syringae or mock treatment and profile> …

Single-nucleus transcriptomes reveal spatiotemporal symbiotic perception and early response in Medicago

Z Liu, J Yang, Y Long, C Zhang, D Wang, X Zhang… - Nature Plants, 2023 - nature.com
Establishing legume–rhizobial symbiosis requires precise coordination of complex
responses in a time-and cell type-specific manner. Encountering Rhizobium, rapid changes …

Water deficit aggravated the inhibition of photosynthetic performance of maize under mercury stress but is alleviated by brassinosteroids

Y Tang, J Zhang, L Wang, H Wang, H Long… - Journal of Hazardous …, 2023 - Elsevier
Mercury (Hg) significantly inhibits maize (Zea mays L.) production, which could be
aggravated by water deficit (WD) due to climate change. However, there is no report on the …

Integrated mass spectrometry imaging and single‐cell transcriptome atlas strategies provide novel insights into taxoid biosynthesis and transport in Taxus mairei …

C Yu, K Hou, H Zhang, X Liang, C Chen… - The Plant …, 2023 - Wiley Online Library
Taxol, which is a widely used important chemotherapeutic agent, was originally isolated
from Taxus stem barks. However, little is known about the precise distribution of taxoids and …

Time-resolved single-cell and spatial gene regulatory atlas of plants under pathogen attack

T Nobori, A Monell, TA Lee, J Zhou, J Nery, JR Ecker - bioRxiv, 2023 - biorxiv.org
Plant leaf intercellular space provides a nutrient-rich and heterogeneous niche for microbes
that critically impacts plant health. However, how individual plant cells respond to …

Leaf hydraulic maze: Abscisic acid effects on bundle sheath, palisade, and spongy mesophyll conductance

A Yaaran, E Erez, C Procko, M Moshelion - Plant Physiology, 2023 - academic.oup.com
Leaf hydraulic conductance (Kleaf) facilitates the supply of water, enabling continual CO2
uptake while maintaining plant water status. We hypothesized that bundle sheath and …

A single-nucleus atlas of seed-to-seed development in Arabidopsis

TA Lee, T Nobori, N Illouz-Eliaz, J Xu, B Jow, JR Nery… - bioRxiv, 2023 - biorxiv.org
Extensive studies of the reference plant Arabidopsis have enabled deep understandings of
tissues throughout development, yet a census of cell types and states throughout …

Large language models in plant biology

HYI Lam, XE Ong, M Mutwil - Trends in Plant Science, 2024 - cell.com
Large language models (LLMs), such as ChatGPT, have taken the world by storm. However,
LLMs are not limited to human language and can be used to analyze sequential data, such …