Biomimetic hydrogel supports initiation and growth of patient-derived breast tumor organoids
E Prince, J Cruickshank, W Ba-Alawi… - Nature …, 2022 - nature.com
Patient-derived tumor organoids (PDOs) are a highly promising preclinical model that
recapitulates the histology, gene expression, and drug response of the donor patient tumor …
recapitulates the histology, gene expression, and drug response of the donor patient tumor …
Cancer-associated fibroblast heterogeneity and its influence on the extracellular matrix and the tumor microenvironment
K Knipper, SI Lyu, A Quaas, CJ Bruns… - International Journal of …, 2023 - mdpi.com
The tumor microenvironment comprises multiple cell types, like cancer cells, endothelial
cells, fibroblasts, and immune cells. In recent years, there have been massive research …
cells, fibroblasts, and immune cells. In recent years, there have been massive research …
The multi-faceted extracellular matrix: Unlocking its secrets for understanding the perpetuation of lung fibrosis
M Nizamoglu, JK Burgess - Current Tissue Microenvironment Reports, 2021 - Springer
Abstract Purpose of Review Lung fibrosis is currently thought to stem from an aberrant
wound healing response after recurring (micro) injuries in the lung epithelium, together with …
wound healing response after recurring (micro) injuries in the lung epithelium, together with …
Fiber alignment in 3D collagen networks as a biophysical marker for cell contractility
D Böhringer, A Bauer, I Moravec, L Bischof, D Kah… - Matrix Biology, 2023 - Elsevier
Cells cultured in 3D fibrous biopolymer matrices exert traction forces on their environment
that induce deformations and remodeling of the fiber network. By measuring these …
that induce deformations and remodeling of the fiber network. By measuring these …
Collagen fiber centerline tracking in fibrotic tissue via deep neural networks with variational autoencoder-based synthetic training data generation
The role of fibrillar collagen in the tissue microenvironment is critical in disease contexts
ranging from cancers to chronic inflammations, as evidenced by many studies. Quantifying …
ranging from cancers to chronic inflammations, as evidenced by many studies. Quantifying …
Intratumor graph neural network recovers hidden prognostic value of multi-biomarker spatial heterogeneity
L Qiu, D Kang, C Wang, W Guo, F Fu, Q Wu… - Nature …, 2022 - nature.com
Biomarkers are indispensable for precision medicine. However, focused single-biomarker
development using human tissue has been complicated by sample spatial heterogeneity. To …
development using human tissue has been complicated by sample spatial heterogeneity. To …
[HTML][HTML] Quantitative image analysis of fibrillar collagens reveals novel diagnostic and prognostic biomarkers and histotype-dependent aberrant mechanobiology in …
E Almici, M Arshakyan, JL Carrasco, A Martínez… - Modern Pathology, 2023 - Elsevier
Fibrillar collagens are the most abundant extracellular matrix components in non–small cell
lung cancer (NSCLC). However, the potential of collagen fiber descriptors as a source of …
lung cancer (NSCLC). However, the potential of collagen fiber descriptors as a source of …
Multimodal microscopic imaging with deep learning for highly effective diagnosis of breast cancer
J Wu, Z Xu, L Shang, Z Wang, S Zhou, H Shang… - Optics and Lasers in …, 2023 - Elsevier
Accurate and rapid diagnosis of breast cancer is particularly important since it becomes the
primary malignant tumor threatening women's health. Although pathological diagnosis with …
primary malignant tumor threatening women's health. Although pathological diagnosis with …
[HTML][HTML] Phase-specific signatures of wound fibroblasts and matrix patterns define cancer-associated fibroblast subtypes
MS Wietecha, D Lauenstein, M Cangkrama, S Seiler… - Matrix Biology, 2023 - Elsevier
Healing wounds and cancers present remarkable cellular and molecular parallels, but the
specific roles of the healing phases are largely unknown. We developed a bioinformatics …
specific roles of the healing phases are largely unknown. We developed a bioinformatics …
Evaluation of a polarization-enhanced laparoscopy prototype for improved intra-operative visualization of peritoneal metastases
T Schnelldorfer, E Gnanatheepam, R Trout, A Gado… - Scientific Reports, 2023 - nature.com
Despite careful staging, the accuracy for preoperative detection of small distant metastases
remains poor, creating a clinical need for enhanced operative staging to detect occult …
remains poor, creating a clinical need for enhanced operative staging to detect occult …