Microbial oceanography and the Hawaii Ocean Time-series programme

DM Karl, MJ Church - Nature Reviews Microbiology, 2014 - nature.com
Abstract The Hawaii Ocean Time-series (HOT) programme has been tracking microbial and
biogeochemical processes in the North Pacific Subtropical Gyre since October 1988. The …

[图书][B] Marine microbiology: ecology & applications

CB Munn - 2019 - taylorfrancis.com
The third edition of this bestselling text has been rigorously updated to reflect major new
discoveries and concepts since 2011, especially progress due to extensive application of …

Microbial rhodopsins are major contributors to the solar energy captured in the sea

L Gómez-Consarnau, JA Raven, NM Levine… - Science …, 2019 - science.org
All known phototrophic metabolisms on Earth rely on one of three categories of energy-
converting pigments: chlorophyll-a (rarely-d), bacteriochlorophyll-a (rarely-b), and retinal …

Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean

Y Shi, GW Tyson, JM Eppley, EF DeLong - The ISME journal, 2011 - academic.oup.com
As part of an ongoing survey of microbial community gene expression in the ocean, we
sequenced and compared∼ 38 Mbp of community transcriptomes and∼ 157 Mbp of …

Archaea—timeline of the third domain

R Cavicchioli - Nature Reviews Microbiology, 2011 - nature.com
The Archaea evolved as one of the three primary lineages several billion years ago, but the
first archaea to be discovered were described in the scientific literature about 130 years ago …

Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration

L Steindler, MS Schwalbach, DP Smith, F Chan… - PloS one, 2011 - journals.plos.org
Previous studies have demonstrated that Candidatus Pelagibacter ubique, a member of the
SAR11 clade, constitutively expresses proteorhodopsin (PR) proteins that can function as …

Energetic basis of microbial growth and persistence in desert ecosystems

PM Leung, SK Bay, DV Meier, E Chiri, DA Cowan… - Msystems, 2020 - Am Soc Microbiol
Microbial life is surprisingly abundant and diverse in global desert ecosystems. In these
environments, microorganisms endure a multitude of physicochemical stresses, including …

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

DM Needham, S Yoshizawa… - Proceedings of the …, 2019 - National Acad Sciences
Giant viruses are remarkable for their large genomes, often rivaling those of small bacteria,
and for having genes thought exclusive to cellular life. Most isolated to date infect nonmarine …

Metabolic reprogramming and longevity in quiescence

J Dworkin, CS Harwood - Annual Review of Microbiology, 2022 - annualreviews.org
Since Jacques Monod's foundational work in the 1940s, investigators studying bacterial
physiology have largely (but not exclusively) focused on the exponential phase of bacterial …

Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage

D Boeuf, JM Eppley, DR Mende, RR Malmstrom… - Microbiome, 2021 - Springer
Background Oceanic microbiomes play a pivotal role in the global carbon cycle and are
central to the transformation and recycling of carbon and energy in the ocean's interior …