Transfer RNAs as dynamic and critical regulators of cancer progression
AM Pinzaru, SF Tavazoie - Nature Reviews Cancer, 2023 - nature.com
Transfer RNAs (tRNAs) have been historically viewed as non-dynamic adaptors that decode
the genetic code into proteins. Recent work has uncovered dynamic regulatory roles for …
the genetic code into proteins. Recent work has uncovered dynamic regulatory roles for …
Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification
O Schwengers, L Jelonek… - Microbial …, 2021 - microbiologyresearch.org
Command-line annotation software tools have continuously gained popularity compared to
centralized online services due to the worldwide increase of sequenced bacterial genomes …
centralized online services due to the worldwide increase of sequenced bacterial genomes …
The IMG/M data management and analysis system v. 7: content updates and new features
IMA Chen, K Chu, K Palaniappan, A Ratner… - Nucleic acids …, 2023 - academic.oup.com
Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img. jgi.
doe. gov/m/) at the Department of Energy (DOE) Joint Genome Institute (JGI) continues to …
doe. gov/m/) at the Department of Energy (DOE) Joint Genome Institute (JGI) continues to …
Pharokka: a fast scalable bacteriophage annotation tool
In recent years, there has been an increasing interest in bacteriophages, which has led to
growing numbers of bacteriophage genomic sequences becoming available. Consequently …
growing numbers of bacteriophage genomic sequences becoming available. Consequently …
The IMG/M data management and analysis system v. 6.0: new tools and advanced capabilities
IMA Chen, K Chu, K Palaniappan, A Ratner… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img. jgi.
doe. gov/m/) contains annotated isolate genome and metagenome datasets sequenced at …
doe. gov/m/) contains annotated isolate genome and metagenome datasets sequenced at …
[HTML][HTML] Expansion of the global RNA virome reveals diverse clades of bacteriophages
High-throughput RNA sequencing offers broad opportunities to explore the Earth RNA
virome. Mining 5,150 diverse metatranscriptomes uncovered> 2.5 million RNA virus contigs …
virome. Mining 5,150 diverse metatranscriptomes uncovered> 2.5 million RNA virus contigs …
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases
Nucleic acids research, 2021 - academic.oup.com
RNAcentral is a comprehensive database of non-coding RNA (ncRNA) sequences that
provides a single access point to 44 RNA resources and> 18 million ncRNA sequences from …
provides a single access point to 44 RNA resources and> 18 million ncRNA sequences from …
The unique gut microbiome of giant pandas involved in protein metabolism contributes to the host's dietary adaption to bamboo
F Deng, C Wang, D Li, Y Peng, L Deng, Y Zhao… - Microbiome, 2023 - Springer
Background The gut microbiota of the giant panda (Ailuropoda melanoleuca), a global
symbol of conservation, are believed to be involved in the host's dietary switch to a fibrous …
symbol of conservation, are believed to be involved in the host's dietary switch to a fibrous …
A genomic catalogue of soil microbiomes boosts mining of biodiversity and genetic resources
Soil harbors a vast expanse of unidentified microbes, termed as microbial dark matter,
presenting an untapped reservoir of microbial biodiversity and genetic resources, but has …
presenting an untapped reservoir of microbial biodiversity and genetic resources, but has …
A swapped genetic code prevents viral infections and gene transfer
Engineering the genetic code of an organism has been proposed to provide a firewall from
natural ecosystems by preventing viral infections and gene transfer,,,,–. However, numerous …
natural ecosystems by preventing viral infections and gene transfer,,,,–. However, numerous …