Mass spectrometry‐based label‐free quantitative proteomics

W Zhu, JW Smith, CM Huang - BioMed research international, 2010 - Wiley Online Library
In order to study the differential protein expression in complex biological samples, strategies
for rapid, highly reproducible and accurate quantification are necessary. Isotope labeling …

High-throughput proteomics

Z Zhang, S Wu, DL Stenoien… - Annual review of …, 2014 - annualreviews.org
Mass spectrometry (MS)–based high-throughput proteomics is the core technique for large-
scale protein characterization. Due to the extreme complexity of proteomes, sophisticated …

Foodomics: MS‐based strategies in modern food science and nutrition

M Herrero, C Simó, V García‐Cañas… - Mass spectrometry …, 2012 - Wiley Online Library
Modern research in food science and nutrition is moving from classical methodologies to
advanced analytical strategies in which MS‐based techniques play a crucial role. In this …

High-pH reversed-phase chromatography with fraction concatenation for 2D proteomic analysis

F Yang, Y Shen, DG Camp… - Expert review of proteomics, 2012 - Taylor & Francis
Orthogonal high-resolution separations are critical for attaining improved analytical dynamic
range and protein coverage in proteomic measurements. High-pH reversed-phase liquid …

Multi-parameter phenotypic profiling: using cellular effects to characterize small-molecule compounds

Y Feng, TJ Mitchison, A Bender, DW Young… - Nature Reviews Drug …, 2009 - nature.com
Multi-parameter phenotypic profiling of small molecules provides important insights into their
mechanisms of action, as well as a systems level understanding of biological pathways and …

[HTML][HTML] Deciphering post-translational modification codes

AP Lothrop, MP Torres, SM Fuchs - FEBS letters, 2013 - Elsevier
Post-translational modifications (PTMs) occur on nearly all proteins. Many domains within
proteins are modified on multiple amino acid sidechains by diverse enzymes to create a …

2D gels still have a niche in proteomics

A Rogowska-Wrzesinska, MC Le Bihan… - Journal of …, 2013 - Elsevier
With the rapid advance of MS-based proteomics one might think that 2D gel-based
proteomics is dead. This is far from the truth. Current research has shown that there are still …

Multi-dimensional liquid chromatography in proteomics—a review

X Zhang, A Fang, CP Riley, M Wang, FE Regnier… - Analytica chimica …, 2010 - Elsevier
Proteomics is the large-scale study of proteins, particularly their expression, structures and
functions. This still-emerging combination of technologies aims to describe and characterize …

Proteomics in evolutionary ecology: linking the genotype with the phenotype

AP Diz, M MARTÍNEZ‐FERNÁNDEZ… - Molecular …, 2012 - Wiley Online Library
The study of the proteome (proteomics), which includes the dynamics of protein expression,
regulation, interactions and its function, has played a less prominent role in evolutionary and …

Review of three-dimensional liquid chromatography platforms for bottom-up proteomics

VA Duong, JM Park, H Lee - International Journal of Molecular Sciences, 2020 - mdpi.com
Proteomics is a large-scale study of proteins, aiming at the description and characterization
of all expressed proteins in biological systems. The expressed proteins are typically highly …