Sequencing and characterizing short tandem repeats in the human genome
HA Tanudisastro, IW Deveson, H Dashnow… - Nature Reviews …, 2024 - nature.com
Short tandem repeats (STRs) are highly polymorphic sequences throughout the human
genome that are composed of repeated copies of a 1–6-bp motif. Over 1 million variable …
genome that are composed of repeated copies of a 1–6-bp motif. Over 1 million variable …
Beyond the exome: what's next in diagnostic testing for Mendelian conditions
Despite advances in clinical genetic testing, including the introduction of exome sequencing
(ES), more than 50% of individuals with a suspected Mendelian condition lack a precise …
(ES), more than 50% of individuals with a suspected Mendelian condition lack a precise …
Normal and pathogenic variation of RFC1 repeat expansions: implications for clinical diagnosis
N Dominik, S Magri, R Currò, E Abati, S Facchini… - Brain, 2023 - academic.oup.com
Cerebellar ataxia, neuropathy and vestibular areflexia syndrome (CANVAS) is an autosomal
recessive neurodegenerative disease, usually caused by biallelic AAGGG repeat …
recessive neurodegenerative disease, usually caused by biallelic AAGGG repeat …
[HTML][HTML] The application of long-read sequencing in clinical settings
Long-read DNA sequencing technologies have been rapidly evolving in recent years, and
their ability to assess large and complex regions of the genome makes them ideal for clinical …
their ability to assess large and complex regions of the genome makes them ideal for clinical …
Data Storage Using DNA
The exponential growth of global data has outpaced the storage capacities of current
technologies, necessitating innovative storage strategies. DNA, as a natural medium for …
technologies, necessitating innovative storage strategies. DNA, as a natural medium for …
[HTML][HTML] Rapid and comprehensive diagnostic method for repeat expansion diseases using nanopore sequencing
S Miyatake, E Koshimizu, A Fujita, H Doi… - NPJ Genomic …, 2022 - nature.com
We developed a diagnostic method for repeat expansion diseases using a long-read
sequencer to improve currently available, low throughput diagnostic methods. We employed …
sequencer to improve currently available, low throughput diagnostic methods. We employed …
[HTML][HTML] The landscape of genomic structural variation in Indigenous Australians
ALM Reis, M Rapadas, JM Hammond… - Nature, 2023 - nature.com
Indigenous Australians harbour rich and unique genomic diversity. However, Aboriginal and
Torres Strait Islander ancestries are historically under-represented in genomics research …
Torres Strait Islander ancestries are historically under-represented in genomics research …
Efficient real-time selective genome sequencing on resource-constrained devices
Background Third-generation nanopore sequencers offer selective sequencing or “Read
Until” that allows genomic reads to be analyzed in real time and abandoned halfway if not …
Until” that allows genomic reads to be analyzed in real time and abandoned halfway if not …
Analysis and benchmarking of small and large genomic variants across tandem repeats
Tandem repeats (TRs) are highly polymorphic in the human genome, have thousands of
associated molecular traits and are linked to over 60 disease phenotypes. However, they …
associated molecular traits and are linked to over 60 disease phenotypes. However, they …
Long‐read sequencing for molecular diagnostics in constitutional genetic disorders
LK Conlin, E Aref‐Eshghi, DA McEldrew… - Human …, 2022 - Wiley Online Library
Long‐read sequencing (LRS) has been around for more than a decade, but widespread
adoption of the technology has been slow due to the perceived high error rates and high …
adoption of the technology has been slow due to the perceived high error rates and high …