Annotation error in public databases: misannotation of molecular function in enzyme superfamilies
AM Schnoes, SD Brown, I Dodevski… - PLoS computational …, 2009 - journals.plos.org
Due to the rapid release of new data from genome sequencing projects, the majority of
protein sequences in public databases have not been experimentally characterized; rather …
protein sequences in public databases have not been experimentally characterized; rather …
DNA Sequence-Based Identification of Fusarium: A Work in Progress
Accurate species-level identification of an etiological agent is crucial for disease diagnosis
and management because knowing the agent's identity connects it with what is known about …
and management because knowing the agent's identity connects it with what is known about …
Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi)
F Badotti, FS de Oliveira, CF Garcia, ABM Vaz… - BMC microbiology, 2017 - Springer
Background Fungi are among the most abundant and diverse organisms on Earth. However,
a substantial amount of the species diversity, relationships, habitats, and life strategies of …
a substantial amount of the species diversity, relationships, habitats, and life strategies of …
Sequence-based classification and identification of Fungi
Fungal taxonomy and ecology have been revolutionized by the application of molecular
methods and both have increasing connections to genomics and functional biology …
methods and both have increasing connections to genomics and functional biology …
Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification
The internal transcribed spacer (ITS) region of the nuclear ribosomal repeat unit is the most
popular locus for species identification and subgeneric phylogenetic inference in sequence …
popular locus for species identification and subgeneric phylogenetic inference in sequence …
Updating the evolutionary history of Carnivora (Mammalia): a new species-level supertree complete with divergence time estimates
K Nyakatura, ORP Bininda-Emonds - BMC biology, 2012 - Springer
Background Although it has proven to be an important foundation for investigations of
carnivoran ecology, biology and evolution, the complete species-level supertree for …
carnivoran ecology, biology and evolution, the complete species-level supertree for …
International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database—the quality controlled standard tool for routine identification of …
Human and animal fungal pathogens are a growing threat worldwide leading to emerging
infections and creating new risks for established ones. There is a growing need for a rapid …
infections and creating new risks for established ones. There is a growing need for a rapid …
Progress towards DNA barcoding of fungi
KA Seifert - Molecular ecology resources, 2009 - Wiley Online Library
The use of DNA sequences for identifying fungi and fungus‐like organisms predates the
DNA barcoding movement by at least 10 years. A brief overview of the mycological shift from …
DNA barcoding movement by at least 10 years. A brief overview of the mycological shift from …
Current state and perspectives of fungal DNA barcoding and rapid identification procedures
Fungal research is experiencing a new wave of methodological improvements that most
probably will boost mycology as profoundly as molecular phylogeny has done during the …
probably will boost mycology as profoundly as molecular phylogeny has done during the …
DNA barcoding in Mucorales: an inventory of biodiversity
G Walther, J Pawłowska… - … and Evolution of …, 2013 - ingentaconnect.com
The order Mucorales comprises predominantly fast-growing saprotrophic fungi, some of
which are used for the fermentation of foodstuffs but it also includes species known to cause …
which are used for the fermentation of foodstuffs but it also includes species known to cause …