[HTML][HTML] Emerging roles of RNA-binding proteins in neurodevelopment

AS Parra, CA Johnston - Journal of Developmental Biology, 2022 - mdpi.com
Diverse cell types in the central nervous system (CNS) are generated by a relatively small
pool of neural stem cells during early development. Spatial and temporal regulation of stem …

[HTML][HTML] TREX tetramer disruption alters RNA processing necessary for corticogenesis in THOC6 Intellectual Disability Syndrome

EA Werren, GR LaForce, A Srivastava… - Nature …, 2024 - nature.com
THOC6 variants are the genetic basis of autosomal recessive THOC6 Intellectual Disability
Syndrome (TIDS). THOC6 is critical for mammalian Transcription Export complex (TREX) …

[HTML][HTML] An improved CRISPR/dCas9 interference tool for neuronal gene suppression

CG Duke, SV Bach, JS Revanna, FA Sultan… - Frontiers in Genome …, 2020 - frontiersin.org
The expression of genetic material governs brain development, differentiation, and function,
and targeted manipulation of gene expression is required to understand contributions of …

mRNA isoform balance in neuronal development and disease

GR LaForce, P Philippidou… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
Balanced mRNA isoform diversity and abundance are spatially and temporally regulated
throughout cellular differentiation. The proportion of expressed isoforms contributes to cell …

Alternative splicing programming of axon formation

S Zheng - Wiley Interdisciplinary Reviews: RNA, 2020 - Wiley Online Library
Alternative pre‐mRNA splicing generates multiple mRNA isoforms of different structures and
functions from a single gene. While the prevalence of alternative splicing control is widely …

Conserved functions of RNA-binding proteins in muscle

E Nikonova, SY Kao, K Ravichandran, A Wittner… - … International Journal of …, 2019 - Elsevier
Animals require different types of muscle for survival, for example for circulation, motility,
reproduction and digestion. Much emphasis in the muscle field has been placed on …

[HTML][HTML] MicroExonator enables systematic discovery and quantification of microexons across mouse embryonic development

GE Parada, R Munita, I Georgakopoulos-Soares… - Genome biology, 2021 - Springer
Background Microexons, exons that are≤ 30 nucleotides, are a highly conserved and
dynamically regulated set of cassette exons. They have key roles in nervous system …

Functional impact and regulation of alternative splicing in mouse heart development and disease

C Marti-Gomez, J Larrasa-Alonso… - Journal of …, 2022 - Springer
Alternative splicing (AS) plays a major role in the generation of transcript diversity. In the
heart, roles have been described for some AS variants, but the global impact and regulation …

Alteration of synaptic protein composition during developmental synapse maturation

T Kaizuka, T Takumi - European Journal of Neuroscience, 2024 - Wiley Online Library
The postsynaptic density (PSD) is a collection of specialized proteins assembled beneath
the postsynaptic membrane of dendritic spines. The PSD proteome comprises~ 1000 …

IsoResolve: predicting splice isoform functions by integrating gene and isoform-level features with domain adaptation

HD Li, C Yang, Z Zhang, M Yang, FX Wu… - …, 2021 - academic.oup.com
Motivation High resolution annotation of gene functions is a central goal in functional
genomics. A single gene may produce multiple isoforms with different functions through …