Network analysis of microarray data
DNA microarrays are widely used to investigate gene expression. Even though the classical
analysis of microarray data is based on the study of differentially expressed genes, it is well …
analysis of microarray data is based on the study of differentially expressed genes, it is well …
[HTML][HTML] Multi-omics analysis predicts fibronectin 1 as a prognostic biomarker in glioblastoma multiforme
F Kabir, MNH Apu - Genomics, 2022 - Elsevier
Glioblastoma (GBM) is one of the most malignant and intractable central nervous system
tumors with high recurrence, low survival rate, and poor prognosis. Despite the advances of …
tumors with high recurrence, low survival rate, and poor prognosis. Despite the advances of …
[HTML][HTML] Machine learning approaches for diagnosing depression using EEG: A review
Y Liu, C Pu, S Xia, D Deng, X Wang… - Translational Neuroscience, 2022 - degruyter.com
Depression has become one of the most crucial public health issues, threatening the quality
of life of over 300 million people throughout the world. Nevertheless, the clinical diagnosis of …
of life of over 300 million people throughout the world. Nevertheless, the clinical diagnosis of …
[HTML][HTML] Weighted gene coexpression network analysis reveals essential genes and pathways in bipolar disorder
ZQ Zhang, WW Wu, JD Chen, GY Zhang, JY Lin… - Frontiers in …, 2021 - frontiersin.org
Bipolar disorder (BD) is a major and highly heritable mental illness with severe psychosocial
impairment, but its etiology and pathogenesis remains unclear. This study aimed to identify …
impairment, but its etiology and pathogenesis remains unclear. This study aimed to identify …
[HTML][HTML] Perkinsus marinus suppresses in vitro eastern oyster apoptosis via IAP-dependent and caspase-independent pathways involving TNFR, NF-kB, and oxidative …
EM Witkop, GH Wikfors, DA Proestou… - Developmental & …, 2022 - Elsevier
The protozoan parasite Perkinsus marinus causes Dermo disease in eastern oysters,
Crassostrea virginica, and can suppress apoptosis of infected hemocytes using incompletely …
Crassostrea virginica, and can suppress apoptosis of infected hemocytes using incompletely …
[HTML][HTML] Bioinformatics and systems-biology analysis to determine the effects of Coronavirus disease 2019 on patients with allergic asthma
H Fang, Z Sun, Z Chen, A Chen, D Sun… - Frontiers in …, 2022 - frontiersin.org
Background The coronavirus disease (COVID-19) pandemic has posed a significant
challenge for global health systems. Increasing evidence shows that asthma phenotypes …
challenge for global health systems. Increasing evidence shows that asthma phenotypes …
[HTML][HTML] Identification of metabolic pathways differentially regulated in somatic and zygotic embryos of maritime pine
C Ávila, MT Llebrés, V Castro-Rodríguez… - Frontiers in Plant …, 2022 - frontiersin.org
Embryogenesis is a complex phase of conifer development involving hundreds of genes,
and a proper understanding of this process is critical not only to produce embryos with …
and a proper understanding of this process is critical not only to produce embryos with …
[HTML][HTML] Data-driven structural analysis of small cell lung cancer transcription factor network suggests potential subtype regulators and transition pathways
Small cell lung cancer (SCLC) is an aggressive disease and challenging to treat due to its
mixture of transcriptional subtypes and subtype transitions. Transcription factor (TF) …
mixture of transcriptional subtypes and subtype transitions. Transcription factor (TF) …
Comparative transcriptome profiling of near isogenic lines PBW343 and FLW29 to unravel defense related genes and pathways contributing to stripe rust resistance in …
Stripe rust (Sr), caused by Puccinia striiformis f. sp. tritici (Pst), is the most devastating
disease that poses serious threat to the wheat-growing nations across the globe …
disease that poses serious threat to the wheat-growing nations across the globe …
[HTML][HTML] Integrative analysis of the methylome and transcriptome of tomato fruit (Solanum lycopersicum L.) induced by postharvest handling
J Zhou, S Zhou, B Chen, K Sangsoy… - Horticulture …, 2024 - academic.oup.com
Tomato fruit ripening is triggered by the demethylation of key genes, which alters their
transcriptional levels thereby initiating and propagating a cascade of physiological events …
transcriptional levels thereby initiating and propagating a cascade of physiological events …