A robust methodology for assessing differential homeolog contributions to the transcriptomes of allopolyploids

JL Boatwright, LM McIntyre, AM Morse, S Chen… - Genetics, 2018 - academic.oup.com
Polyploidy has played a pivotal and recurring role in angiosperm evolution. Allotetraploids
arise from hybridization between species and possess duplicated gene copies (homeologs) …

An introduction to global production trends and uses, history and evolution, and genetic and biotechnological improvements in cotton

K Jabran, S Ul‐Allah, BS Chauhan… - Cotton …, 2019 - Wiley Online Library
Cotton plant has been domesticated in tropical and sub‐tropical climates of the world but
severe climate is not suitable for good lint yields. Globally, cotton is grown on an area of …

Segmental allotetraploidy generates extensive homoeologous expression rewiring and phenotypic diversity at the population level in rice

Y Sun, Y Wu, C Yang, S Sun, X Lin, L Liu… - Molecular …, 2017 - Wiley Online Library
Allopolyploidization, that is, concomitant merging and doubling of two or more divergent
genomes in a common nucleus/cytoplasm, is known to instantly alter genomewide …

Polyploid speciation and genome evolution: lessons from recent allopolyploids

ML Ainouche, JF Wendel - … evolution, speciation, coevolution and origin of …, 2014 - Springer
Whole genome duplication (polyploidy) represents a primary mechanism of sympatric
speciation, especially in plants where it is particularly prevalent. In this chapter, we focus on …

Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade …

CA Saski, BE Scheffler, AM Hulse-Kemp, B Liu… - Scientific Reports, 2017 - nature.com
Like those of many agricultural crops, the cultivated cotton is an allotetraploid and has a
large genome (~ 2.5 gigabase pairs). The two sub genomes, A and D, are highly similar but …

Polyploidy and the petal transcriptome of Gossypium

A Rambani, JT Page, JA Udall - BMC plant biology, 2014 - Springer
Background Genes duplicated by polyploidy (homoeologs) may be differentially expressed
in plant tissues. Recent research using DNA microarrays and RNAseq data have described …

Applications of Virus-Induced Gene Silencing in Cotton

Y Tian, Y Fang, K Zhang, Z Zhai, Y Yang, M He, X Cao - Plants, 2024 - mdpi.com
Virus-induced gene silencing (VIGS) is an RNA-mediated reverse genetics technique that
has become an effective tool to investigate gene function in plants. Cotton is one of the most …

Reference Transcriptomes and Detection of Duplicated Copies in Hexaploid and Allododecaploid Spartina Species (Poaceae)

J Boutte, J Ferreira de Carvalho… - Genome Biology and …, 2016 - academic.oup.com
In this study, we report the assembly and annotation of five reference transcriptomes for the
European hexaploid Spartina species (S. maritima, S. alterniflora and their homoploid …

Extensive changes in gene expression and alternative splicing due to homoeologous exchange in rice segmental allopolyploids

Z Zhang, T Fu, Z Liu, X Wang, H Xun, G Li… - Theoretical and Applied …, 2019 - Springer
Key message We report rampant homoeologous exchanges in progenies of a newly
synthesized rice segmental allotetraploid and demonstrate their consequences to changes …

[PDF][PDF] 芸墓属异源多倍体减数分裂行为的遗传研究进展

崔成, 李顺达, 李再云 - 中国油料作物学报, 2018 - jouroilcrops.cn
减数分裂中的二倍体化是异源多倍体物种形成与进化的细胞学基础. 本文综述了芸墓属异源多倍
体中细胞学行为及遗传机制的研究进展. 虽然芸墓属三个栽培二倍体种间的成对杂交进化形成了 …