Homoeologous Exchanges and Gene Losses Generate Diversity and Differentiate the B. napus Genome from that of Its Ancestors

B Samans, R Snowdon, AS Mason - The Brassica napus Genome, 2018 - Springer
Brassica napus (rapeseed) is a young allopolyploid species, formed from the union between
progenitor species B. rapa (2 n= AA) and B. oleracea (2 n= CC) less than 7500 years ago …

Transcriptome analysis of extant cotton progenitors revealed tetraploidization and identified genome-specific single nucleotide polymorphism in diploid and …

X Guan, G Nah, Q Song, JA Udall, DM Stelly… - BMC research …, 2014 - Springer
Background The most widely cultivated cotton (Gossypium hirsutum L., AD-genome) is
derived from tetraploidization between A-and D-genome species. G. arboreum L.(A …

Molecular and genomic tools provide insights on crop domestication and evolution

M Geleta, R Ortiz - Advances in Agronomy, 2016 - Elsevier
Rapid progress in genomic research and the development of genome-wide molecular
markers for various crops significantly improved our knowledge on plant domestication and …

Dynamics of duplicated gene expression in Polyploid Cotton

KL Adams, JF Wendel - Polyploid and hybrid genomics, 2013 - Wiley Online Library
Gossypium (cotton) has been developed as a particularly useful system for examining how
gene expression patterns and levels change after polyploidy. Recent studies have provided …

Functional divergence of cellulose synthase orthologs in between wild Gossypium raimondii and domesticated G. arboreum diploid cotton species

HJ Kim, GN Thyssen, X Song, CD Delhom, Y Liu - Cellulose, 2019 - Springer
Cellulose synthase (CESA) synthesizes cellulose for plant cell walls and determines plant
morphology and biomass amount. The recently sequenced cotton genomes of two diploid …

Construction of a cotton VIGS library for functional genomics study

M Li, F Li, P He - Plant Gene Silencing: Methods and Protocols, 2015 - Springer
To facilitate cotton functional genomics studies and identify cotton genes mediating biotic
and abiotic stress responses, we report here a detailed protocol of construction of a VIGS …

The gap in research on polyploidization between plants and vertebrates: model systems and strategic challenges

J Chai, Y Su, F Huang, S Liu, M Tao, RW Murphy, J Luo - Science bulletin, 2015 - Elsevier
Polyploidization via whole-genome duplications (WGD) is a common phenomenon in
organisms. However, investigations into this phenomenon differ greatly between plants and …

GENETIC MARKERS AND GENOME-WIDE ASSOCIATION STUDY IN PLANTS.

T Dilnur, Z Pan - Eurasian Journal of Applied Biotechnology, 2023 - search.ebscohost.com
Due to the advanced sequencing technologies, breeders and researchers can use DNA
markers to characterize various plants' genetic diversity, kinship, and population structures …

A comparative genomics approach revealed evolutionary dynamics of microsatellite imperfection and conservation in genus Gossypium

MM Ahmed, C Shen, AQ Khan, MA Wahid, M Shaban… - Hereditas, 2017 - Springer
Background Ongoing molecular processes in a cell could target microsatellites, a kind of
repetitive DNA, owing to length variations and motif imperfection. Mutational mechanisms …

Population Genomics of Cotton

L Mendu, K Ghose, V Mendu - 2022 - Springer
Cotton (Gossypium) is a fiber-producing oil seed crop with significant economic and
scientific importance in natural textile fiber and edible oil industries. Cotton is an ideal crop …