Combinatorial transcriptional control of plant specialized metabolism

M Colinas, A Goossens - Trends in plant science, 2018 - cell.com
Plants produce countless specialized compounds of diverse chemical nature and biological
activities. Their biosynthesis often exclusively occurs either in response to environmental …

Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana

H Zhao, W Zhang, T Zhang, Y Lin, Y Hu, C Fang… - Genome biology, 2020 - Springer
Background Regulation of transcription depends on interactions between cis-regulatory
elements (CREs) and regulatory proteins. Active CREs are imbedded in open chromatin that …

The protein–protein interaction landscape of transcription factors during gynoecium development in Arabidopsis

H Herrera-Ubaldo, SE Campos, P López-Gómez… - Molecular Plant, 2023 - cell.com
Flowers are composed of organs whose identity is defined by the combinatorial activity of
transcription factors (TFs). The interactions between MADS-box TFs and protein complex …

FaMYB123 interacts with FabHLH3 to regulate the late steps of anthocyanin and flavonol biosynthesis during ripening

FJ Martínez‐Rivas, R Blanco‐Portales… - The Plant …, 2023 - Wiley Online Library
In this work, we identified and functionally characterized the strawberry (Fragaria×
ananassa) R2R3 MYB transcription factor FaMYB123. As in most genes associated with …

An engineered combinatorial module of transcription factors boosts production of monoterpenoid indole alkaloids in Catharanthus roseus

F Schweizer, M Colinas, J Pollier… - Metabolic …, 2018 - Elsevier
To fend off microbial pathogens and herbivores, plants have evolved a wide range of
defense strategies such as physical barriers, or the production of anti-digestive proteins or …

Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade

H van Mourik, ADJ van Dijk, N Stortenbeker… - BMC plant biology, 2017 - Springer
Abstract Background Small Auxin-Upregulated RNA (SAUR) genes encode growth
regulators that induce cell elongation. Arabidopsis contains more than 70 SAUR genes, of …

BMP2-dependent gene regulatory network analysis reveals Klf4 as a novel transcription factor of osteoblast differentiation

S Yu, J Guo, Z Sun, C Lin, H Tao, Q Zhang, Y Cui… - Cell death & …, 2021 - nature.com
Transcription factors (TFs) regulate the expression of target genes, inducing changes in cell
morphology or activities needed for cell fate determination and differentiation. The BMP …

Combinatorial interactions of the LEC1 transcription factor specify diverse developmental programs during soybean seed development

L Jo, JM Pelletier, SW Hsu, R Baden… - Proceedings of the …, 2020 - National Acad Sciences
The LEAFY COTYLEDON1 (LEC1) transcription factor is a central regulator of seed
development, because it controls diverse biological programs during seed development …

Transcription factor bZIP52 modulates Arabidopsis seed oil biosynthesis through interaction with WRINKLED1

Y Yang, Q Kong, WT Tee, Y Li, PM Low, B Patra… - Plant …, 2023 - academic.oup.com
Transcriptional regulation mediated by combinatorial interaction of transcription factors (TFs)
is a key molecular mechanism modulating plant development and metabolism. Basic …

TEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR4 interacts with WRINKLED1 to mediate seed oil biosynthesis

Q Kong, SK Singh, JJ Mantyla, S Pattanaik… - Plant …, 2020 - academic.oup.com
Cross-family transcription factor (TF) interactions play critical roles in the regulation of plant
developmental and metabolic pathways. WRINKLED1 (WRI1) is a key TF governing oil …