[HTML][HTML] Application of metagenomics in the human gut microbiome

WL Wang, SY Xu, ZG Ren, L Tao… - World journal of …, 2015 - ncbi.nlm.nih.gov
There are more than 1000 microbial species living in the complex human intestine. The gut
microbial community plays an important role in protecting the host against pathogenic …

A metagenomic insight into our gut's microbiome

P Lepage, MC Leclerc, M Joossens, S Mondot… - Gut, 2013 - gut.bmj.com
Advances in sequencing technology and the development of metagenomic and
bioinformatics methods have opened up new ways to investigate the 1014 microorganisms …

Fast and sensitive taxonomic classification for metagenomics with Kaiju

P Menzel, KL Ng, A Krogh - Nature communications, 2016 - nature.com
Metagenomics emerged as an important field of research not only in microbial ecology but
also for human health and disease, and metagenomic studies are performed on increasingly …

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

Y Yin, X Mao, J Yang, X Chen, F Mao… - Nucleic acids …, 2012 - academic.oup.com
Carbohydrate-active enzymes (CAZymes) are very important to the biotech industry,
particularly the emerging biofuel industry because CAZymes are responsible for the …

Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

M Hess, A Sczyrba, R Egan, TW Kim, H Chokhawala… - Science, 2011 - science.org
The paucity of enzymes that efficiently deconstruct plant polysaccharides represents a major
bottleneck for industrial-scale conversion of cellulosic biomass into biofuels. Cow rumen …

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

S Mukherjee, R Seshadri, NJ Varghese… - Nature …, 2017 - nature.com
We present 1,003 reference genomes that were sequenced as part of the Genomic
Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence …

Microbial diversity of cellulose hydrolysis

DB Wilson - Current opinion in microbiology, 2011 - Elsevier
Enzymatic hydrolysis of cellulose by microorganisms is a key step in the global carbon cycle.
Despite its abundance only a small percentage of microorganisms can degrade cellulose …

Biotechnological uses of enzymes from psychrophiles

R Cavicchioli, T Charlton, H Ertan… - Microbial …, 2011 - Wiley Online Library
The bulk of the Earth's biosphere is cold (eg 90% of the ocean's waters are≤ 5° C),
sustaining a broad diversity of microbial life. The permanently cold environments vary from …

[图书][B] Bacterial biogeochemistry: the ecophysiology of mineral cycling

T Fenchel, H Blackburn, GM King - 2012 - books.google.com
Bacterial Biogeochemistry, Third Edition focuses on bacterial metabolism and its relevance
to the environment, including the decomposition of soil, food chains, nitrogen fixation …

Rumen microbial (meta) genomics and its application to ruminant production

DP Morgavi, WJ Kelly, PH Janssen, GT Attwood - animal, 2013 - cambridge.org
Meat and milk produced by ruminants are important agricultural products and are major
sources of protein for humans. Ruminant production is of considerable economic value and …