The complex role of sequence and structure in the stability and function of the TIM barrel proteins
YH Chan - 2017 - repository.escholarship.umassmed …
Sequence divergence of orthologous proteins enables adaptation to a plethora of
environmental stresses and promotes evolution of novel functions. As one of the most …
environmental stresses and promotes evolution of novel functions. As one of the most …
Droplet-based microfluidics for the genotype-phenotype mapping of model enzymes
D Chauvin - 2017 - theses.hal.science
The question of how sequence encodes proteins' function is essential to understand
molecular evolution but still remains elusive. Droplet-based microfluidics allows to use micro …
molecular evolution but still remains elusive. Droplet-based microfluidics allows to use micro …
[图书][B] Training, Evaluating, and Understanding Evolutionary Models for Protein Sequences
RM Rao - 2021 - search.proquest.com
Novel protein sequences arise through mutation. These mutations may be deleterious,
beneficial, or neutral; the effect of a mutation on an organism's evolutionary fitness is …
beneficial, or neutral; the effect of a mutation on an organism's evolutionary fitness is …
Natural Selection Inference and Sampling Formulae
P Khromov - 2020 - search.proquest.com
Abstract Theory of evolution provides a simple, flexible, and elegant framework to study and
explain life around us. Population genetics is a mathematical wing of evolutionary theory …
explain life around us. Population genetics is a mathematical wing of evolutionary theory …
[PDF][PDF] Identification of biochemically neutral positions in liver pyruvate kinase
AW Fenton, L Swint-Kruse - scholar.archive.org
Understanding how each residue position contributes to protein function has been a
longstanding goal in protein science. Substitution studies have historically focused on …
longstanding goal in protein science. Substitution studies have historically focused on …
Evolutionary significance of structural segments trailing beta strand 5 and alpha helix 10 in the design of catalytically active NAL superfamily
PM Kumar, P Manoharan - bioRxiv, 2018 - biorxiv.org
The divergence in catalytic actions of N-acetyl neuraminic lyase (NAL) superfamily proteins,
all of which have pyruvate as a substrate, suggests common ancestry. Lack of catalytic triad …
all of which have pyruvate as a substrate, suggests common ancestry. Lack of catalytic triad …
[PDF][PDF] Predicting the effects of mutations with alignment-free generative models of protein sequences
AJ Riesselman, JB Ingraham, A Kollasch… - Building maps from …, 2019 - dash.harvard.edu
Protein sequences are constrained by complex interactions between the residues that
compose them, and models that can capture genetic variation are powerful tools in …
compose them, and models that can capture genetic variation are powerful tools in …
[PDF][PDF] Let us know how access to this document benefits you.
L Zhang - N Engl J Med, 2015 - core.ac.uk
Integrins have the ability to impact major aspects of epithelial biology including adhesion,
migration, invasion, signaling and differentiation, as well as the formation and progression of …
migration, invasion, signaling and differentiation, as well as the formation and progression of …
[引用][C] Evolutionary constraints in NAL superfamily protein: Secondary structural segment trailing the beta strand 5 and alpha helix 10
PM Kumar, P Manoharan - bioRxiv, 2018 - Cold Spring Harbor Laboratory