Next-generation data filtering in the genomics era

W Hemstrom, JA Grummer, G Luikart… - Nature Reviews …, 2024 - nature.com
Genomic data are ubiquitous across disciplines, from agriculture to biodiversity, ecology,
evolution and human health. However, these datasets often contain noise or errors and are …

Ecological opportunity leads to higher diversity and probability of trophic specialisation in Arctic charr

S Fenton, CW Bean, SAM Martin… - … Journal of the …, 2024 - academic.oup.com
Understanding the extrinsic factors that drive the emergence of biological diversity is critical
to its protection and management. However, even superficially similar local environments …

k-mer-based approaches to bridging pangenomics and population genetics

MD Roberts, O Davis, EB Josephs… - arXiv preprint arXiv …, 2024 - arxiv.org
Many commonly studied species now have more than one chromosome-scale genome
assembly, revealing a large amount of genetic diversity previously missed by approaches …

Divergent lineages in a young species: The case of datilillo (Yucca valida), a broadly distributed plant from the Baja California Peninsula

A Aleman, MC Arteaga, J Gasca‐Pineda… - American Journal of …, 2023 - Wiley Online Library
Premise Globally, barriers triggered by climatic changes have caused habitat fragmentation
and population allopatric divergence. Across North America, oscillations during the …

Previously unmeasured genetic diversity explains part of Lewontin's paradox in a k-mer-based meta-analysis of 112 plant species

M Roberts, EB Josephs - bioRxiv, 2024 - biorxiv.org
At the molecular level, most evolution is expected to be neutral. A key prediction of this
expectation is that the level of genetic diversity in a population should scale with population …

Haplotype-resolved genome and population genomics of the threatened garden dormouse in Europe

PA Byerly, A von Thaden, E Leushkin, L Hilgers, S Liu… - bioRxiv, 2024 - biorxiv.org
Genomic resources are important for evaluating genetic diversity and supporting
conservation efforts. The garden dormouse (Eliomys quercinus) is a small rodent that has …

The Conservation Genetics of Elassoma alabamae and Phylogeography of Elassoma evergladei

DL Pounders - 2024 - search.proquest.com
The southeastern US is a hotspot of aquatic biodiversity and endemism in the upland and
Coastal Plain regions. One component of this biodiversity is the Pygmy Sunfishes of the …