Biogeographic patterns of polyploid species for the angiosperm flora in China

KL Wang, PR Deng, Z Yao, JY Dong… - … of Systematics and …, 2023 - Wiley Online Library
Exploring the frequency and distribution pattern of polyploid species in geographic
parameters is of significance in understanding the mechanisms of polyploid speciation and …

Transposable elements in Rosaceae: insights into genome evolution, expression dynamics, and Syntenic gene regulation

Z Yu, J Li, H Wang, B Ping, X Li, Z Liu… - Horticulture …, 2024 - academic.oup.com
Transposable elements (TEs) exert significant influence on plant genomic structure and
gene expression. Here, we explored TE-related aspects across fourteen Rosaceae …

Plant lineage-specific amplification of transcription factor binding motifs by miniature inverted-repeat transposable elements (MITEs)

J Morata, F Marín, J Payet… - Genome biology and …, 2018 - academic.oup.com
Transposable elements are one of the main drivers of plant genome evolution. Transposon
insertions can modify the gene coding capacity or the regulation of their expression, the …

Evolution of small RNA expression following hybridization and allopolyploidization: insights from Spartina species (Poaceae, Chloridoideae)

A Cavé-Radet, D Giraud, O Lima, A El Amrani… - Plant molecular …, 2020 - Springer
Abstract Key Message Differential expression of mi-RNAs targeting developmental
processes and progressive downregulation of repeat-associated siRNAs following genome …

The nature and genomic landscape of repetitive DNA classes in Chrysanthemum nankingense shows recent genomic changes

F Zhang, F Chen, T Schwarzacher… - Annals of …, 2023 - academic.oup.com
Abstract Background and Aims Tandemly repeated DNA and transposable elements
represent most of the DNA in higher plant genomes. High-throughput sequencing allows a …

Analysis of retrotransposon abundance, diversity and distribution in holocentric Eleocharis (Cyperaceae) genomes

TB de Souza, SR Chaluvadi, L Johnen… - Annals of …, 2018 - academic.oup.com
Abstract Background and Aims Long terminal repeat-retrotransposons (LTR-RTs) comprise
a large portion of plant genomes, with massive repeat blocks distributed across the …

Characterization of genome‐wide long terminal repeat retrotransposons provide insights into trait evolution of four grapevine species

GQ He, HY Jin, YZ Cheng, YH Yu… - Journal of Systematics …, 2023 - Wiley Online Library
Grapevine is one of the most economically important crops in the world. Although long
terminal repeat (LTR) retrotransposons are thought to have played an important role in …

Diversity of the repetitive DNA fraction in Cestrum, the genus with the largest genomes within Solanaceae

TB de Souza, LM Parteka, R de Assis… - Molecular Biology …, 2022 - Springer
Background Cestrum species present large genomes (2 C=~ 24 pg), a high occurrence of B
chromosomes and great diversity in heterochromatin bands. Despite this diversity …

Evolution of RADIALIS and DIVARICATA gene lineages in flowering plants with an expanded sampling in non‐core eudicots

Y Madrigal, JF Alzate, F González… - American Journal of …, 2019 - Wiley Online Library
Premise of the Study Bilateral symmetry in core eudicot flowers is established by the
differential expression of CYCLOIDEA (CYC), DICHOTOMA (DICH), and RADIALIS (RAD) …

Impact of transposable elements on the evolution of complex living systems and their epigenetic control

A Viviani, M Ventimiglia, M Fambrini, A Vangelisti… - Biosystems, 2021 - Elsevier
Transposable elements (TEs) contribute to genomic innovations, as well as genome
instability, across a wide variety of species. Popular designations such as 'selfish DNA'and …