[HTML][HTML] A comprehensive study of the WRKY transcription factor family in strawberry
J Garrido-Gala, JJ Higuera, A Rodríguez-Franco… - Plants, 2022 - mdpi.com
WRKY transcription factors play critical roles in plant growth and development or stress
responses. Using up-to-date genomic data, a total of 64 and 257 WRKY genes have been …
responses. Using up-to-date genomic data, a total of 64 and 257 WRKY genes have been …
[HTML][HTML] InpactorDB: a classified lineage-level plant LTR retrotransposon reference library for free-alignment methods based on machine learning
S Orozco-Arias, PA Jaimes, MS Candamil… - Genes, 2021 - mdpi.com
Long terminal repeat (LTR) retrotransposons are mobile elements that constitute the major
fraction of most plant genomes. The identification and annotation of these elements via …
fraction of most plant genomes. The identification and annotation of these elements via …
[HTML][HTML] Characterization and Dynamics of Repeatomes in Closely Related Species of Hieracium (Asteraceae) and Their Synthetic and Apomictic Hybrids
D Zagorski, M Hartmann, YJK Bertrand… - Frontiers in Plant …, 2020 - frontiersin.org
The repetitive content of the plant genome (repeatome) often represents its largest fraction
and is frequently correlated with its size. Transposable elements (TEs), the main component …
and is frequently correlated with its size. Transposable elements (TEs), the main component …
Insights into the Evolution of Ohnologous Sequences and Their Epigenetic Marks Post-WGD in Malus Domestica
T Lallemand, M Leduc, A Desmazières… - Genome Biology and …, 2023 - academic.oup.com
Abstract A Whole Genome Duplication (WGD) event occurred several Ma in a Rosaceae
ancestor, giving rise to the Maloideae subfamily which includes today many pome fruits such …
ancestor, giving rise to the Maloideae subfamily which includes today many pome fruits such …
Movements of transposable elements contribute to the genomic plasticity and species diversification in an asexually reproducing nematode pest
DKL Kozlowski… - Evolutionary …, 2021 - Wiley Online Library
Despite reproducing without sexual recombination, Meloidogyne incognita is an adaptive
and versatile phytoparasitic nematode. This species displays a global distribution, can …
and versatile phytoparasitic nematode. This species displays a global distribution, can …
Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment
X Ma, S Vanneste, J Chang, L Ambrosino, K Barry… - Nature plants, 2024 - nature.com
We present chromosome-level genome assemblies from representative species of three
independently evolved seagrass lineages: Posidonia oceanica, Cymodocea nodosa …
independently evolved seagrass lineages: Posidonia oceanica, Cymodocea nodosa …
[引用][C] Non-random genome editing and natural cellular engineering in cognition-based evolution
WB Miller Jr, FJ Enguita, AL Leitão - Cells, 2021 - MDPI
[HTML][HTML] Genome-wide analysis of DNA polymorphisms, the methylome and transcriptome revealed that multiple factors are associated with low pollen fertility in …
Autotetraploid rice is a useful germplasm with high biomass production; however, low fertility
is the main barrier in commercial utilization. In our previous study, differential expression of …
is the main barrier in commercial utilization. In our previous study, differential expression of …
[HTML][HTML] Comparative Analysis of Transposable Elements and the Identification of Candidate Centromeric Elements in the Prunus Subgenus Cerasus and Its …
L Wang, Y Wang, J Zhang, Y Feng, Q Chen, ZS Liu… - Genes, 2022 - mdpi.com
The subgenus Cerasus and its relatives include many crucial economic drupe fruits and
ornamental plants. Repetitive elements make up a large part of complex genomes, and …
ornamental plants. Repetitive elements make up a large part of complex genomes, and …
TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting
M Lexa, P Jedlicka, I Vanat, M Cervenansky… - …, 2020 - academic.oup.com
Abstract Motivation Transposable elements (TEs) in eukaryotes often get inserted into one
another, forming sequences that become a complex mixture of full-length elements and their …
another, forming sequences that become a complex mixture of full-length elements and their …
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