Harnessing genomics to fast-track genetic improvement in aquaculture

RD Houston, TP Bean, DJ Macqueen… - Nature Reviews …, 2020 - nature.com
Aquaculture is the fastest-growing farmed food sector and will soon become the primary
source of fish and shellfish for human diets. In contrast to crop and livestock production …

[HTML][HTML] Microbiome composition and function in aquatic vertebrates: small organisms making big impacts on aquatic animal health

L Sehnal, E Brammer-Robbins… - Frontiers in …, 2021 - frontiersin.org
Aquatic ecosystems are under increasing stress from global anthropogenic and natural
changes, including climate change, eutrophication, ocean acidification, and pollution. In this …

A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

TPRA Legrand, JW Wynne, LS Weyrich… - Reviews in …, 2020 - Wiley Online Library
The mucosal surfaces of fish represent an important barrier that supports and regulates a
diverse array of microbial assemblages and contributes to the overall health and fitness of …

Analysis of the gut and gill microbiome of resistant and susceptible lines of rainbow trout (Oncorhynchus mykiss)

RM Brown, GD Wiens, I Salinas - Fish & shellfish immunology, 2019 - Elsevier
Commensal microorganisms present at mucosal surfaces play a vital role in protecting the
host organism from bacterial infection. There are multiple factors that contribute to selecting …

[HTML][HTML] Gut microbiome composition, not alpha diversity, is associated with survival in a natural vertebrate population

SF Worsley, CS Davies, ME Mannarelli, MI Hutchings… - Animal microbiome, 2021 - Springer
Background The vertebrate gut microbiome (GM) can vary substantially across individuals
within the same natural population. Although there is evidence linking the GM to health in …

[HTML][HTML] Cortisol-related signatures of stress in the fish microbiome

TM Uren Webster, D Rodriguez-Barreto… - Frontiers in …, 2020 - frontiersin.org
Exposure to environmental stressors can compromise fish health and fitness. Little is known
about how stress-induced microbiome disruption may contribute to these adverse health …

[HTML][HTML] Dissecting the factors shaping fish skin microbiomes in a heterogeneous inland water system

Y Krotman, TM Yergaliyev, R Alexander Shani… - Microbiome, 2020 - Springer
Background Fish skin microbiomes are rarely studied in inland water systems, in spite of
their importance for fish health and ecology. This is mainly because fish species distribution …

Host genetics and geography influence microbiome composition in the sponge Ircinia campana

SM Griffiths, RE Antwis, L Lenzi, A Lucaci… - Journal of animal …, 2019 - Wiley Online Library
Marine sponges are hosts to large, diverse communities of microorganisms. These
microbiomes are distinct among sponge species and from seawater bacterial communities …

Environmental plasticity and colonisation history in the Atlantic salmon microbiome: a translocation experiment

TM Uren Webster, D Rodriguez‐Barreto… - Molecular …, 2020 - Wiley Online Library
Microbial communities associated with the gut and the skin are strongly influenced by
environmental factors, and can rapidly adapt to change. Historical processes may also affect …

[HTML][HTML] Gut microbiota of ring-tailed lemurs (Lemur catta) vary across natural and captive populations and correlate with environmental microbiota

SL Bornbusch, LK Greene, S Rahobilalaina… - Animal Microbiome, 2022 - Springer
Background Inter-population variation in host-associated microbiota reflects differences in
the hosts' environments, but this characterization is typically based on studies comparing …