The highways and byways of mRNA decay

NL Garneau, J Wilusz, CJ Wilusz - Nature reviews Molecular cell …, 2007 - nature.com
When considering the control of gene expression, the focus has traditionally been on
transcriptional regulation. Recently, however, the large contribution made by mRNA decay …

Small nucleolar RNAs tell a different tale

J Kufel, P Grzechnik - Trends in Genetics, 2019 - cell.com
Transcribing RNA Polymerase II interacts with multiple factors that orchestrate maturation
and stabilisation of messenger RNA. For the majority of noncoding RNAs, the polymerase …

[HTML][HTML] Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly (A) polymerase

F Wyers, M Rougemaille, G Badis, JC Rousselle… - Cell, 2005 - cell.com
Since detection of an RNA molecule is the major criterion to define transcriptional activity,
the fraction of the genome that is expressed is generally considered to parallel the …

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II

M Kim, NJ Krogan, L Vasiljeva, OJ Rando, E Nedea… - Nature, 2004 - nature.com
The carboxy-terminal domain (CTD) of the RNA polymerase II (RNApII) largest subunit
consists of multiple heptapeptide repeats with the consensus sequence YSPTSPS. Different …

Controlling nuclear RNA levels

M Schmid, TH Jensen - Nature Reviews Genetics, 2018 - nature.com
RNA turnover is an integral part of cellular RNA homeostasis and gene expression
regulation. Whereas the cytoplasmic control of protein-coding mRNA is often the focus of …

RNA quality control in eukaryotes

MK Doma, R Parker - Cell, 2007 - cell.com
Eukaryotic cells contain numerous RNA quality-control systems that are important for
shaping the transcriptome of eukaryotic cells. These systems not only prevent accumulation …

[HTML][HTML] Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome

JA Chekanova, BD Gregory, SV Reverdatto, H Chen… - Cell, 2007 - cell.com
The exosome complex plays a central and essential role in RNA metabolism. However,
comprehensive studies of exosome substrates and functional analyses of its subunits are …

Functional Genomic Analysis of C. elegans Molting

AR Frand, S Russel, G Ruvkun - PLoS biology, 2005 - journals.plos.org
Although the molting cycle is a hallmark of insects and nematodes, neither the endocrine
control of molting via size, stage, and nutritional inputs nor the enzymatic mechanism for …

Nrd1 interacts with the nuclear exosome for 3′ processing of RNA polymerase II transcripts

L Vasiljeva, S Buratowski - Molecular cell, 2006 - cell.com
The exosome complex is involved in multiple RNA processing and degradation pathways.
How exosome is recruited to particular RNA substrates and then chooses between RNA …

The human cap-binding complex is functionally connected to the nuclear RNA exosome

PR Andersen, M Domanski, MS Kristiansen… - Nature structural & …, 2013 - nature.com
Nuclear processing and quality control of eukaryotic RNA is mediated by the RNA exosome,
which is regulated by accessory factors. However, the mechanism of exosome recruitment to …