[HTML][HTML] Viral proteases as therapeutic targets

T Majerová, J Konvalinka - Molecular Aspects of Medicine, 2022 - Elsevier
Some medically important viruses―including retroviruses, flaviviruses, coronaviruses, and
herpesviruses―code for a protease, which is indispensable for viral maturation and …

Recent progress in targeting KRAS mutant cancers with covalent G12C-specific inhibitors

LS Rathod, PS Dabhade, SN Mokale - Drug Discovery Today, 2023 - Elsevier
Abstract KRAS G12C has been identified as a potential target in the treatment of solid
tumors. One of the most often transformed proteins in human cancers is the small Kirsten rat …

SwissDock 2024: major enhancements for small-molecule docking with Attracting Cavities and AutoDock Vina

M Bugnon, UF Röhrig, M Goullieux… - Nucleic Acids …, 2024 - academic.oup.com
Drug discovery aims to identify potential therapeutic compounds capable of modulating the
activity of specific biological targets. Molecular docking can efficiently support this process …

[PDF][PDF] Mitigating the risk of antimalarial resistance via covalent dual-subunit inhibition of the Plasmodium proteasome

I Deni, BH Stokes, KE Ward, KJ Fairhurst… - Cell chemical …, 2023 - cell.com
The Plasmodium falciparum proteasome constitutes a promising antimalarial target, with
multiple chemotypes potently and selectively inhibiting parasite proliferation and synergizing …

CavityPlus 2022 update: an integrated platform for comprehensive protein cavity detection and property analyses with user-friendly tools and cavity databases

S Wang, J Xie, J Pei, L Lai - Journal of Molecular Biology, 2023 - Elsevier
Ligand binding sites provide essential information for uncovering protein functions and
structure-based drug discovery. To facilitate cavity detection and property analysis process …

DrugMap: A quantitative pan-cancer analysis of cysteine ligandability

M Takahashi, HB Chong, S Zhang, TY Yang… - Cell, 2024 - cell.com
Cysteine-focused chemical proteomic platforms have accelerated the clinical development
of covalent inhibitors for a wide range of targets in cancer. However, how different oncogenic …

The importance of binding kinetics and drug–target residence time in pharmacology

KE Knockenhauer, RA Copeland - British Journal of …, 2023 - Wiley Online Library
A dominant assumption in pharmacology throughout the 20th century has been that in vivo
target occupancy—and attendant pharmacodynamics—depends on the systemic …

Protein–protein interactions: developing small-molecule inhibitors/stabilizers through covalent strategies

B Lucero, KR Francisco, LJ Liu, CR Caffrey… - Trends in …, 2023 - cell.com
The development of small-molecule inhibitors or stabilizers of selected protein–protein
interactions (PPIs) of interest holds considerable promise for the development of research …

Emerging and Re-emerging Warheads for Targeted Covalent Inhibitors: An Update

L Hillebrand, XJ Liang, RAM Serafim… - Journal of Medicinal …, 2024 - ACS Publications
Covalent inhibitors and other types of covalent modalities have seen a revival in the past two
decades, with a variety of new targeted covalent drugs having been approved in recent …

Advancing targeted protein degradation via multiomics profiling and artificial intelligence

M Duran-Frigola, M Cigler… - Journal of the American …, 2023 - ACS Publications
Only around 20% of the human proteome is considered to be druggable with small-molecule
antagonists. This leaves some of the most compelling therapeutic targets outside the reach …