The yeast deletion collection: a decade of functional genomics

G Giaever, C Nislow - Genetics, 2014 - academic.oup.com
The yeast deletion collections comprise> 21,000 mutant strains that carry precise start-to-
stop deletions of∼ 6000 open reading frames. This collection includes heterozygous and …

Budding Yeast for Budding Geneticists: A Primer on the Saccharomyces cerevisiae Model System

AA Duina, ME Miller, JB Keeney - Genetics, 2014 - academic.oup.com
The budding yeast Saccharomyces cerevisiae is a powerful model organism for studying
fundamental aspects of eukaryotic cell biology. This Primer article presents a brief historical …

A global genetic interaction network maps a wiring diagram of cellular function

M Costanzo, B VanderSluis, EN Koch, A Baryshnikova… - Science, 2016 - science.org
INTRODUCTION Genetic interactions occur when mutations in two or more genes combine
to generate an unexpected phenotype. An extreme negative or synthetic lethal genetic …

Systematic analysis of complex genetic interactions

E Kuzmin, B VanderSluis, W Wang, G Tan… - Science, 2018 - science.org
INTRODUCTION Genetic interactions occur when mutations in different genes combine to
result in a phenotype that is different from expectation based on those of the individual …

[HTML][HTML] The inner nuclear membrane is a metabolically active territory that generates nuclear lipid droplets

A Romanauska, A Köhler - Cell, 2018 - cell.com
The inner nuclear membrane (INM) encases the genome and is fused with the outer nuclear
membrane (ONM) to form the nuclear envelope. The ONM is contiguous with the …

Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER

BG Wong, CP Mancuso, S Kiriakov, CJ Bashor… - Nature …, 2018 - nature.com
Precise control over microbial cell growth conditions could enable detection of minute
phenotypic changes, which would improve our understanding of how genotypes are shaped …

Systematic humanization of yeast genes reveals conserved functions and genetic modularity

AH Kachroo, JM Laurent, CM Yellman, AG Meyer… - Science, 2015 - science.org
To determine whether genes retain ancestral functions over a billion years of evolution and
to identify principles of deep evolutionary divergence, we replaced 414 essential yeast …

High-content screening for quantitative cell biology

MM Usaj, EB Styles, AJ Verster, H Friesen, C Boone… - Trends in cell …, 2016 - cell.com
High-content screening (HCS), which combines automated fluorescence microscopy with
quantitative image analysis, allows the acquisition of unbiased multiparametric data at the …

Affinity‐purification coupled to mass spectrometry: Basic principles and strategies

WH Dunham, M Mullin, AC Gingras - Proteomics, 2012 - Wiley Online Library
Identifying the interactions established by a protein of interest can be a critical step in
understanding its function. This is especially true when an unknown protein of interest is …

In‐depth and 3‐dimensional exploration of the budding yeast phosphoproteome

MC Lanz, K Yugandhar, S Gupta, EJ Sanford… - EMBO …, 2021 - embopress.org
Phosphorylation is one of the most dynamic and widespread post‐translational
modifications regulating virtually every aspect of eukaryotic cell biology. Here, we assemble …