[HTML][HTML] Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function

J Luo, JJ Zhou, JZ Zhang - International journal of molecular sciences, 2018 - mdpi.com
Auxin plays a crucial role in the diverse cellular and developmental responses of plants
across their lifespan. Plants can quickly sense and respond to changes in auxin levels, and …

Revisiting criteria for plant microRNA annotation in the era of big data

MJ Axtell, BC Meyers - The Plant Cell, 2018 - academic.oup.com
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

MA Matzke, RA Mosher - Nature Reviews Genetics, 2014 - nature.com
RNA-directed DNA methylation (RdDM) is the major small RNA-mediated epigenetic
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …

[HTML][HTML] Genome size diversity and its impact on the evolution of land plants

J Pellicer, O Hidalgo, S Dodsworth, IJ Leitch - Genes, 2018 - mdpi.com
Genome size is a biodiversity trait that shows staggering diversity across eukaryotes, varying
over 64,000-fold. Of all major taxonomic groups, land plants stand out due to their …

Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads

R Kajitani, K Toshimoto, H Noguchi, A Toyoda… - Genome …, 2014 - genome.cshlp.org
Although many de novo genome assembly projects have recently been conducted using
high-throughput sequencers, assembling highly heterozygous diploid genomes is a …

Dynamics of genome size evolution in birds and mammals

A Kapusta, A Suh, C Feschotte - Proceedings of the …, 2017 - National Acad Sciences
Genome size in mammals and birds shows remarkably little interspecific variation compared
with other taxa. However, genome sequencing has revealed that many mammal and bird …

MADS-domain transcription factors and the floral quartet model of flower development: linking plant development and evolution

G Theißen, R Melzer, F Rümpler - Development, 2016 - journals.biologists.com
The floral quartet model of floral organ specification poses that different tetramers of MIKC-
type MADS-domain transcription factors control gene expression and hence the identity of …

[HTML][HTML] The tea tree genome provides insights into tea flavor and independent evolution of caffeine biosynthesis

EH Xia, HB Zhang, J Sheng, K Li, QJ Zhang, C Kim… - Molecular plant, 2017 - cell.com
Tea is the world's oldest and most popular caffeine-containing beverage with immense
economic, medicinal, and cultural importance. Here, we present the first high-quality …

[HTML][HTML] A Ca2+-sensor switch for tolerance to elevated salt stress in Arabidopsis

L Steinhorst, G He, LK Moore, S Schültke… - Developmental Cell, 2022 - cell.com
Excessive Na+ in soils inhibits plant growth. Here, we report that Na+ stress triggers primary
calcium signals specifically in a cell group within the root differentiation zone, thus forming a" …

[HTML][HTML] A phylogenomically informed five-order system for the closest relatives of land plants

S Hess, SK Williams, A Busch, I Irisarri, CF Delwiche… - Current Biology, 2022 - cell.com
The evolution of streptophytes had a profound impact on life on Earth. They brought forth
those photosynthetic eukaryotes that today dominate the macroscopic flora: the land plants …