The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families

S de Vries, JMR FürstJansen, I Irisarri… - The Plant …, 2021 - Wiley Online Library
Land plants constantly respond to fluctuations in their environment. Part of their response is
the production of a diverse repertoire of specialized metabolites. One of the foremost …

Transposable element influences on gene expression in plants

CD Hirsch, NM Springer - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Transposable elements (TEs) comprise a major portion of many plant genomes and bursts
of TE movements cause novel genomic variation within species. In order to maintain proper …

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

D Sundell, NR Street, M Kumar, EJ Mellerowicz… - The Plant …, 2017 - academic.oup.com
Trees represent the largest terrestrial carbon sink and a renewable source of ligno-cellulose.
There is significant scope for yield and quality improvement in these largely undomesticated …

[HTML][HTML] A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

JA Chapman, M Mascher, A Buluç, K Barry… - Genome biology, 2015 - Springer
Polyploid species have long been thought to be recalcitrant to whole-genome assembly. By
combining high-throughput sequencing, recent developments in parallel computing, and …

[HTML][HTML] The wax gourd genomes offer insights into the genetic diversity and ancestral cucurbit karyotype

D Xie, Y Xu, J Wang, W Liu, Q Zhou, S Luo… - Nature …, 2019 - nature.com
The botanical family Cucurbitaceae includes a variety of fruit crops with global or local
economic importance. How their genomes evolve and the genetic basis of diversity remain …

[HTML][HTML] The Chrysanthemum nankingense genome provides insights into the evolution and diversification of chrysanthemum flowers and medicinal traits

C Song, Y Liu, A Song, G Dong, H Zhao, W Sun… - Molecular Plant, 2018 - cell.com
Abstract The Asteraceae (Compositae), a large plant family of approximately 24 000–35 000
species, accounts for∼ 10% of all angiosperm species and contributes a lot to plant …

[HTML][HTML] The Torreya grandis genome illuminates the origin and evolution of gymnosperm-specific sciadonic acid biosynthesis

H Lou, L Song, X Li, H Zi, W Chen, Y Gao… - Nature …, 2023 - nature.com
Torreya plants produce dry fruits with assorted functions. Here, we report the 19-Gb
chromosome-level genome assembly of T. grandis. The genome is shaped by ancient whole …

[HTML][HTML] Crossroads in the evolution of plant specialized metabolism

TP Rieseberg, A Dadras, JMR Fürst-Jansen… - Seminars in Cell & …, 2023 - Elsevier
The monophyletic group of embryophytes (land plants) stands out among photosynthetic
eukaryotes: they are the sole constituents of the macroscopic flora on land. In their entirety …

Investigation of terpene diversification across multiple sequenced plant genomes

AM Boutanaev, T Moses, J Zi… - Proceedings of the …, 2015 - National Acad Sciences
Plants produce an array of specialized metabolites, including chemicals that are important
as medicines, flavors, fragrances, pigments and insecticides. The vast majority of this …

[HTML][HTML] Application of somatic embryogenesis in woody plants.

Y Guan, SG Li, XF Fan, ZH Su - Frontiers in Plant Science, 2016 - frontiersin.org
Somatic embryogenesis is a developmental process where a plant somatic cell can
dedifferentiate to a totipotent embryonic stem cell that has the ability to give rise to an …